update vignettes #114
Annotations
10 errors and 27 warnings
|
Run CMD check
cannot open the connection to 'https://zenodo.org/record/10229222/files/lr_network_human_allInfo_30112033.rds'
|
|
Run CMD check
cannot open the connection to 'https://zenodo.org/record/10229222/files/lr_network_human_allInfo_30112033.rds'
|
|
Run CMD check
cannot open the connection to 'https://zenodo.org/record/10229222/files/lr_network_human_allInfo_30112033.rds'
|
|
Run CMD check
cannot open the connection to 'https://zenodo.org/record/10229222/files/lr_network_human_allInfo_30112033.rds'
|
|
Run CMD check
unused arguments (prioritizing_weights = prioritizing_weights, sender_receiver_separate = FALSE)
|
|
Run CMD check
conditions written in contrasts should be in the condition-indicating column! This is not the case, which can lead to errors downstream.
|
|
Run CMD check
could not find function "get_abundance_expression_info"
|
|
Run CMD check
could not find function "get_abundance_expression_info"
|
|
Run CMD check
unused arguments (prioritizing_weights = prioritizing_weights, sender_receiver_separate = FALSE)
|
|
Run CMD check
R CMD check found ERRORs
|
|
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
|
|
Install dependencies pass 2
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 2
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 2
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Set BiocVersion
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Set BiocVersion
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Set BiocVersion
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
|
|
Run CMD check
'::' or ':::' import not declared from: ‘scuttle’
|
|
Run CMD check
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
|
|
Run CMD check
Undocumented arguments in documentation object 'process_abundance_expression_info'
|
|
Run CMD check
Files in the 'vignettes' directory but no files in 'inst/doc':
|
|
Run CMD check
Directory 'inst/doc' does not exist.
|
|
Run CMD check
'::' or ':::' import not declared from: ‘scuttle’
|
|
Run CMD check
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
|
|
Run CMD check
Undocumented arguments in documentation object 'process_abundance_expression_info'
|
|
Run CMD check
Files in the 'vignettes' directory but no files in 'inst/doc':
|
|
Run CMD check
Directory 'inst/doc' does not exist.
|
Loading