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add minimum edge count, remove config leftovers
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kevinschaper committed Oct 3, 2024
1 parent b29bf82 commit af833eb
Showing 1 changed file with 1 addition and 22 deletions.
23 changes: 1 addition & 22 deletions src/alliance_disease_association_ingest/transform.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -40,26 +40,5 @@ edge_properties:
- knowledge_level
- agent_type

min_edge_count: 12000

### Optional parameters - uncomment to use, or remove to ignore
# min_edge_count: 5

# sssom_config: List of SSSOM config options
# columns: List of columns to include
# field_type_map: Dict of field names and their type (using the FieldType enum)
# filters: List of filters to apply
# required_properties: List of properties which must be in json data files
# json_path: List of paths within JSON object containing data to process
# transform_code: Path to a python file to transform the data
# transform_mode: Which mode to use to process the transform file
# global_table: Path to a global table file
# local_table: Path to a local table file

### CSV specific parameters


# header: Header row index
# header_delimiter: Delimiter for header in csv files
# header_prefix: Prefix for header in csv files
# comment_char: Comment character for csv files
# skip_blank_lines: Boolean - whether to skip blank lines in csv files

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