Merge pull request #365 from microbiomedata/issue-352-proc-inst-enum

Issue 352 proc inst enum
microbiomedata · Jul 25, 2022 · e9a8157 · e9a8157
2 parents 3760cf2 + 8e8d122
commit e9a8157
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Showing 3 changed files with 7 additions and 7 deletions.
diff --git a/src/schema/nmdc.yaml b/src/schema/nmdc.yaml
@@ -1061,7 +1061,7 @@ slots:
   biogas_retention_time:
     range: string
   processing_institution:
-    range: string
+    range: processing_institution_enum
     description: The organization that processed the sample.
   omics_type:
     range: string

diff --git a/test/data/gold_project_test.json b/test/data/gold_project_test.json
@@ -18,7 +18,7 @@
       "part_of": [
         "gold:Gs0112340"
       ],
-      "processing_institution": "Joint Genome Institute",
+      "processing_institution": "JGI",
       "type": "nmdc:OmicsProcessing"
     },
     {
@@ -39,7 +39,7 @@
       "part_of": [
         "gold:Gs0112340"
       ],
-      "processing_institution": "Joint Genome Institute",
+      "processing_institution": "JGI",
       "type": "nmdc:OmicsProcessing"
     },
     {
@@ -60,7 +60,7 @@
       "part_of": [
         "gold:Gs0112340"
       ],
-      "processing_institution": "Joint Genome Institute",
+      "processing_institution": "JGI",
       "type": "nmdc:OmicsProcessing"
     }
   ]

diff --git a/test/data/nmdc_example_database.json b/test/data/nmdc_example_database.json
@@ -72,7 +72,7 @@
       "part_of": [
         "gold:Gs0130354"
       ],
-      "processing_institution": "Joint Genome Institute",
+      "processing_institution": "JGI",
       "type": "nmdc:OmicsProcessing"
     },
     {
@@ -94,7 +94,7 @@
       "part_of": [
         "gold:Gs0128849"
       ],
-      "processing_institution": "Joint Genome Institute",
+      "processing_institution": "JGI",
       "type": "nmdc:OmicsProcessing"
     },
     {
@@ -116,7 +116,7 @@
       "part_of": [
         "gold:Gs0134277"
       ],
-      "processing_institution": "Joint Genome Institute",
+      "processing_institution": "JGI",
       "type": "nmdc:OmicsProcessing"
     }
   ],