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@microbiomedata

National Microbiome Data Collaborative

National Microbiome Data Collaborative

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  1. nmdc-schema nmdc-schema Public

    National Microbiome Data Collaborative (NMDC) unified data model

    Python 27 8

  2. NMDC_documentation NMDC_documentation Public

    Document workflows, schemas, and portal

    2 3

Repositories

Showing 10 of 80 repositories
  • nmdc-runtime Public

    Runtime system for NMDC data management and orchestration

    microbiomedata/nmdc-runtime’s past year of commit activity
    HTML 7 5 106 (2 issues need help) 14 Updated Jan 11, 2025
  • nmdc_automation Public

    Prototype automation

    microbiomedata/nmdc_automation’s past year of commit activity
    Python 2 2 40 1 Updated Jan 11, 2025
  • nmdc-edge Public

    Web-based interface to the NMDC EDGE platform

    microbiomedata/nmdc-edge’s past year of commit activity
    JavaScript 4 0 71 (1 issue needs help) 0 Updated Jan 10, 2025
  • docs Public

    User-facing, web-based documentation about the NMDC

    microbiomedata/docs’s past year of commit activity
    Python 1 0 18 1 Updated Jan 10, 2025
  • nmdc_notebooks Public

    Jupyter Notebooks demonstrating R and Python-based access to NMDC metadata and data

    microbiomedata/nmdc_notebooks’s past year of commit activity
    Jupyter Notebook 5 CC0-1.0 0 9 2 Updated Jan 10, 2025
  • nmdc-server Public

    Data portal client and server for NMDC.

    microbiomedata/nmdc-server’s past year of commit activity
    Python 9 0 157 15 Updated Jan 10, 2025
  • nmdc-schema Public

    National Microbiome Data Collaborative (NMDC) unified data model

    microbiomedata/nmdc-schema’s past year of commit activity
    Python 27 CC0-1.0 8 362 (1 issue needs help) 7 Updated Jan 10, 2025
  • nmdc-field-notes Public

    Mobile app for metadata collection on the go

    microbiomedata/nmdc-field-notes’s past year of commit activity
    TypeScript 2 0 30 0 Updated Jan 10, 2025
  • metaMS Public

    Metabolomics Workflows for GC-MS Metabolomics and LC-MS Lipidomics

    microbiomedata/metaMS’s past year of commit activity
    Python 4 BSD-2-Clause 0 3 0 Updated Jan 9, 2025
  • mg_annotation Public

    Metagenome Annotation Workflow

    microbiomedata/mg_annotation’s past year of commit activity
    WDL 4 7 3 3 Updated Jan 9, 2025
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