Merge branch 'main' of github.com:saeyslab/polygloty

_quarto.yml

@@ -9,6 +9,9 @@ book:
     - "Robrecht Cannoodt"
   date: "9/12/2024"
   cover-image: assets/cover.svg
+  site-url: https://saeyslab.github.io/polygloty
+  repo-url: https://github.com/saeyslab/polygloty
+  repo-actions: [edit, issue, source]
   chapters:
     - index.qmd
     - book/intro.qmd
@@ -25,6 +28,10 @@ format:
   html:
     theme: cosmo
     toc: true
+    link-external-icon: true
+    link-external-newwindow: true
+    copy-code: true
+    code-overflow: scroll
 
 # cache computations
 execute:

book/references.bib

@@ -36,3 +36,18 @@ @article{Heumos2023
   month = mar,
   pages = {550–572}
 }
+
+@article{Wratten2021,
+  title = {Reproducible,  scalable,  and shareable analysis pipelines with bioinformatics workflow managers},
+  volume = {18},
+  ISSN = {1548-7105},
+  url = {http://dx.doi.org/10.1038/s41592-021-01254-9},
+  DOI = {10.1038/s41592-021-01254-9},
+  number = {10},
+  journal = {Nature Methods},
+  publisher = {Springer Science and Business Media LLC},
+  author = {Wratten,  Laura and Wilm,  Andreas and G\"{o}ke,  Jonathan},
+  year = {2021},
+  month = sep,
+  pages = {1161–1168}
+}