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fix for louise
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berombau committed Sep 7, 2024
1 parent 677f90d commit 4c5a492
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6 changes: 0 additions & 6 deletions book/in_memory_interoperability.qmd
Original file line number Diff line number Diff line change
Expand Up @@ -254,12 +254,6 @@ pb_obs <- adata$obs[c("sm_name", "cell_type", "plate_name", "well", "plate_well_
pb_obs <- pb_obs[!duplicated(pb_obs), ]
```

```{python pb_obs}
pb_obs = adata.obs[["sm_name", "cell_type", "plate_name", "well"]].copy()
pb_obs.index = adata.obs["plate_well_celltype_reannotated"]
pb_obs = pb_obs.drop_duplicates()
```

Create AnnData object:

```{r pb_anndata}
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