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Finish PICdb integration #16

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merged 8 commits into from
Apr 8, 2024
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@manuelburger manuelburger commented Apr 5, 2024

Respiratory

  • No ett_gcs found
  • No mech_vent found
  • spo2 good, added surgery vital
  • sao2 good
  • resp good, added surgery vital
  • vent_end skipped for now, not found
  • vent_start skipped for now, not found

Hematology

  • basos done
  • bnd not found
  • eos, done
  • esr not found
  • fib done
  • hba1c done
  • hct good
  • hgb done
  • inr_pt Theres 5192 "thrombin time" but not "prothrombin", skipped
  • lymph done
  • mch done
  • mchc done
  • mcv good
  • neut done
  • plt good
  • pt good
  • ptt good
  • rbc removed measurements in urine and stool, added measurement in blood
  • rdw good

Neurological

Could not find any GCS scores or RASS scores

OUTPUT

  • urine and urine_rate done

OUTCOMES

  • death_hosp done
  • death_icu done

TODOS

  • death_icu
  • los_{}
  • Check distributions of data
  • Check death related distributions

@manuelburger manuelburger linked an issue Apr 5, 2024 that may be closed by this pull request
10 tasks
@manuelburger manuelburger requested a review from mlondschien April 8, 2024 09:27
@manuelburger manuelburger merged commit 5f394d0 into main Apr 8, 2024
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@manuelburger manuelburger deleted the 11-further-picdb-variable-integration branch April 8, 2024 11:58
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Further PICdb Variable integration
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