Fixes

ratschlab · Nov 4, 2024 · 2d1379e · 2d1379e
1 parent aa8b9fb
commit 2d1379e
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Showing 3 changed files with 6 additions and 6 deletions.
diff --git a/metagraph/integration_tests/test_align.py b/metagraph/integration_tests/test_align.py
@@ -338,7 +338,7 @@ def test_simple_align_fwd_rev_comp_json_all_graphs(self, representation):
 
         params = self._get_stats(self.tempdir.name + '/genome.MT' + graph_file_extension[representation])
         self.assertEqual('11', params['k'])
-        self.assertEqual('16461', params['nodes (k)'])
+        self.assertEqual('16438', params['nodes (k)'])
         self.assertEqual('basic', params['mode'])
 
         stats_command = '{exe} align --json -i {graph} --align-min-exact-match 0.0 {reads}'.format(
@@ -363,7 +363,7 @@ def test_simple_align_edit_distance_all_graphs(self, representation):
 
         params = self._get_stats(self.tempdir.name + '/genome.MT' + graph_file_extension[representation])
         self.assertEqual('11', params['k'])
-        self.assertEqual('16461', params['nodes (k)'])
+        self.assertEqual('16438', params['nodes (k)'])
         self.assertEqual('basic', params['mode'])
 
         stats_command = '{exe} align --json --align-edit-distance -i {graph} --align-min-exact-match 0.0 {reads}'.format(

diff --git a/metagraph/src/annotation/row_diff_builder.cpp b/metagraph/src/annotation/row_diff_builder.cpp
@@ -288,9 +288,9 @@ std::shared_ptr<const bit_vector> route_at_forks(const graph::DeBruijnGraph &gra
                                                  const std::string &count_vectors_dir,
                                                  const std::string &row_count_extension) {
     logger->trace("Assigning row-diff successors at forks...");
-    
+
     std::shared_ptr<const bit_vector> rd_succ;
-    
+
     bool optimize_forks = false;
     for (const auto &p : fs::directory_iterator(count_vectors_dir)) {
         if (utils::ends_with(p.path(), row_count_extension))

diff --git a/metagraph/src/graph/representation/hash/dbg_hash_fast.cpp b/metagraph/src/graph/representation/hash/dbg_hash_fast.cpp
@@ -74,10 +74,10 @@ class DBGHashFastImpl : public DBGHashFast::DBGHashFastInterface {
                                    const std::function<bool()> &terminate) const override final;
 
     void call_outgoing_kmers(node_index node,
-                                     const OutgoingEdgeCallback &callback) const override final;
+                             const OutgoingEdgeCallback &callback) const override final;
 
     void call_incoming_kmers(node_index node,
-                                     const IncomingEdgeCallback &callback) const override final;
+                             const IncomingEdgeCallback &callback) const override final;
 
     void call_nodes(const std::function<void(node_index)> &callback,
                     const std::function<bool()> &stop_early) const override final;