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openproblems-bio · Jul 19, 2024 · 1d083dd · 1d083dd
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diff --git a/src/api/comp_metric.yaml b/src/api/comp_metric.yaml
@@ -25,6 +25,7 @@ functionality:
       direction: input
       default: ridge
       description: name of regretion to use
+      multiple: true
     - name: --subsample
       type: integer
       direction: input

diff --git a/src/methods/scenicplus/config.vsh.yaml → src/methods/scenicplus/config.novsh.yaml b/src/methods/scenicplus/config.vsh.yaml → src/methods/scenicplus/config.novsh.yaml
diff --git a/src/pre_methods/cistopic/config.novsh.yaml b/src/pre_methods/cistopic/config.novsh.yaml
@@ -0,0 +1,23 @@
+functionality:
+  name: cistopic
+  info:
+    label: cistopic
+    summary: "creates cistopic"
+
+
+  resources:
+    - type: r_script
+      path: script.R
+
+
+platforms:
+  - type: docker
+    image: ghcr.io/openproblems-bio/base_r:1.0.2
+    # setup:
+    #   - type: r
+    #     packages: [dplyr, FNN, chromVAR, doParallel, BuenColors, FigR, BSgenome.Hsapiens.UCSC.hg38]
+
+  - type: native
+  - type: nextflow
+    directives:
+      label: [midtime,midmem,midcpu]
diff --git a/...thods/format_multiomics_R/config.vsh.yaml → ...ods/format_multiomics_R/config.novsh.yaml b/...thods/format_multiomics_R/config.vsh.yaml → ...ods/format_multiomics_R/config.novsh.yaml