bug in multiomics rna file fixed

openproblems-bio · Sep 10, 2024 · 1888e69 · 1888e69
1 parent e1086a0
commit 1888e69
Show file tree

Hide file tree

Showing 2 changed files with 7 additions and 6 deletions.
diff --git a/src/api/comp_control_method.yaml b/src/api/comp_control_method.yaml
@@ -14,6 +14,11 @@ functionality:
       required: false
       direction: input
       default: resources/grn-benchmark/perturbation_data.h5ad
+    - name: --multiomics_rna
+      __merge__: file_multiomics_rna_h5ad.yaml
+      required: false
+      direction: input
+      example: resources_test/grn-benchmark/multiomics_rna.h5ad
     - name: --layer
       type: string
       direction: input

diff --git a/src/control_methods/baseline_corr/config.vsh.yaml b/src/control_methods/baseline_corr/config.vsh.yaml
@@ -5,20 +5,16 @@ functionality:
   info:
     label: baseline_corr
     summary: "Baseline based on Pearson corr"
-
   arguments:
-    - name: --multiomics_rna
-      required: false
-      direction: input
+
     - name: --causal
       type: boolean 
       direction: input
       default: false
     - name: --seed
       type: integer
       direction: input
-
-
+
   resources:
     - type: python_script
       path: script.py