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Add support for raster custom colormap
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{ | ||
"cells": [ | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"[![image](https://jupyterlite.rtfd.io/en/latest/_static/badge.svg)](https://demo.leafmap.org/lab/index.html?path=notebooks/103_raster_colormap.ipynb)\n", | ||
"[![image](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/opengeos/leafmap/blob/master/docs/notebooks/103_raster_colormap.ipynb)\n", | ||
"[![image](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/opengeos/leafmap/HEAD)\n", | ||
"\n", | ||
"**Applying a custom colormap to a raster dataset**\n", | ||
"\n", | ||
"Uncomment the following line to install the `leafmap` package." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 1, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"# %pip install -U \"leafmap[raster]\"" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 2, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"import leafmap\n", | ||
"import rioxarray as rxr" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"Download a sample dataset from GitHub. This dataset is a GeoTIFF file containing the surface water extent in Las Vegas. This dataset is a [NASA OPERA DSWx](https://www.jpl.nasa.gov/go/opera/products/dswx-product-suite/) product. " | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 3, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"url = \"https://github.com/opengeos/datasets/releases/download/raster/OPERA_L3_DSWx_WTR.tif\"" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"filepath = leafmap.download_file(url, quiet=True)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"Load the dataset as an xarray DataArray." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 5, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"da = rxr.open_rasterio(filepath)\n", | ||
"# da" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"The original raster file contains a colormap. We can get the colormap from the raster file as follows:" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 6, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"colormap = leafmap.get_image_colormap(filepath)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"Alternatively, we can define a custom colormap as follows:" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 7, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"colormap = {\n", | ||
" 0: (255, 255, 255),\n", | ||
" 1: (0, 0, 255),\n", | ||
" 2: (180, 213, 244),\n", | ||
" 252: (0, 255, 255),\n", | ||
" 253: (175, 175, 175),\n", | ||
" 254: (0, 0, 127),\n", | ||
" 255: (0, 0, 0),\n", | ||
"}" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"You can apply any data processing types to the xarray DataArray. After that, convert the xarray DataArray to an image in the memory and apply the custom colormap." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 8, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"image = leafmap.array_to_image(da, colormap=colormap)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"Define a legend dictionary to display the legend." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 9, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"legend_dict = {\n", | ||
" \"0: Not water\": (255, 255, 255),\n", | ||
" \"1: Open water\": (0, 0, 255),\n", | ||
" \"2: Partial surface water\": (180, 213, 244),\n", | ||
" \"252: Snow/ice\": (0, 255, 255),\n", | ||
" \"253: Cloud/cloud shadow\": (175, 175, 175),\n", | ||
" \"254: Ocean masked\": (0, 0, 127),\n", | ||
" \"255: Fill value (no data)\": (0, 0, 0),\n", | ||
"}" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"Visualize the raster dataset with the custom colormap and the legend." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"m = leafmap.Map()\n", | ||
"m.add_basemap(\"HYBRID\")\n", | ||
"m.add_raster(image, layer_name=\"Water\", nodata=255)\n", | ||
"m.add_legend(legend_dict=legend_dict)\n", | ||
"m" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"![image](https://github.com/user-attachments/assets/495c6e91-a722-4618-a2f7-3bbca64adca9)" | ||
] | ||
} | ||
], | ||
"metadata": { | ||
"kernelspec": { | ||
"display_name": "geo", | ||
"language": "python", | ||
"name": "python3" | ||
}, | ||
"language_info": { | ||
"codemirror_mode": { | ||
"name": "ipython", | ||
"version": 3 | ||
}, | ||
"file_extension": ".py", | ||
"mimetype": "text/x-python", | ||
"name": "python", | ||
"nbconvert_exporter": "python", | ||
"pygments_lexer": "ipython3", | ||
"version": "3.12.2" | ||
} | ||
}, | ||
"nbformat": 4, | ||
"nbformat_minor": 2 | ||
} |
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