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Fix unsatisfiable class error
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@ar-ibrahim
ar-ibrahim committed Apr 4, 2024
1 parent 7ea7d00 commit f97a5cf
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1 change: 1 addition & 0 deletions src/patterns/data/default/chemical_role_attribute_location.tsv
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Expand Up @@ -8,3 +8,4 @@ OBA:VT0010275 milk hormone amount CHEBI:24621 hormone PATO:0000070 amount UBERON
OBA:2050092 serum metabolite level CHEBI:25212 metabolite PATO:0000070 amount UBERON:0001977 blood serum
OBA:2050078 blood metabolite level CHEBI:25212 metabolite PATO:0000070 amount UBERON:0000178 blood
OBA:2045211 nutrient level in blood CHEBI:33284 nutrient PATO:0000070 amount UBERON:0000178 blood
OBA:2050419 level of endocrine disruptor in urine CHEBI:138015 endocrine disruptor PATO:0000070 amount UBERON:0001088 urine
1 change: 0 additions & 1 deletion src/patterns/data/default/entity_attribute_location.tsv
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Expand Up @@ -5515,4 +5515,3 @@ OBA:2050414 level of Gly-Pro in blood CHEBI:70744 Gly-Pro PATO:0000070 amount UB
OBA:2050415 level of indole-3-butyric acid in blood CHEBI:33070 indole-3-butyric acid PATO:0000070 amount UBERON:0000178 blood PMID:37253714 https://orcid.org/0000-0001-6757-4744
OBA:2050416 level of Phe-Gly in blood CHEBI:73635 Phe-Gly PATO:0000070 amount UBERON:0000178 blood PMID:37253714 https://orcid.org/0000-0001-6757-4744
OBA:2050417 level of Val-Leu in blood CHEBI:75013 Val-Leu PATO:0000070 amount UBERON:0000178 blood PMID:37253714 https://orcid.org/0000-0001-6757-4744
OBA:2050419 level of endocrine disruptor in urine CHEBI:138015 endocrine disruptor PATO:0000070 amount UBERON:0001088 urine level of endocrine disrupting chemical in urine|level of EDC in urine PMID:38150807 https://orcid.org/0000-0001-6757-4744
14 changes: 5 additions & 9 deletions src/patterns/definitions.owl
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Expand Up @@ -7,8 +7,8 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)


Ontology(<http://purl.obolibrary.org/obo/oba/patterns/definitions.owl>
<http://purl.obolibrary.org/obo/oba/releases/2024-02-27/patterns/definitions.owl>
Annotation(owl:versionInfo "2024-02-27")
<http://purl.obolibrary.org/obo/oba/releases/2024-04-04/patterns/definitions.owl>
Annotation(owl:versionInfo "2024-04-04")

Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_10033>))
Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_10112>))
Expand Down Expand Up @@ -105189,14 +105189,10 @@ EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_2050418> ObjectIntersectio

# Class: <http://purl.obolibrary.org/obo/OBA_2050419> (level of endocrine disruptor in urine)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute_location") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/OBA_2050419> "The amount of a endocrine disruptor when measured in urine.")
AnnotationAssertion(<http://purl.org/dc/terms/contributor> <http://purl.obolibrary.org/obo/OBA_2050419> "https://orcid.org/0000-0001-6757-4744")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/OBA_2050419> "PMID:38150807")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_2050419> "level of EDC in urine")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_2050419> "level of endocrine disrupting chemical in urine")
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute_location") <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_2050419> "urine endocrine disruptor amount")
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/chemical_role_attribute_location") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/OBA_2050419> "The amount of endocrine disruptor when measured in urine.")
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/chemical_role_attribute_location") <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_2050419> "urine endocrine disruptor amount")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_2050419> "level of endocrine disruptor in urine")
EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_2050419> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000070> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_138015> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0001088>)))))
EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_2050419> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000070> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_24431> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000087> <http://purl.obolibrary.org/obo/CHEBI_138015>)) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0001088>)))))

# Class: <http://purl.obolibrary.org/obo/OBA_2060000> (aggressive behavior towards inanimate objects rate)

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