This is a primary version of software which can segment the peripheral blood cells and diagnosis them.
For segmentation part we use tf-faster-rcnn.
For detection part we use pretrained ResNet18.
This software is developed in python3 and you should install following libraries:
-pytorch
-tensorflow
-numpy
-PIL
-cv2
-torchvision
-tkinter
- Clone the repository
git clone https://github.com/nimaadmed/yaakhteh
- Build tf-faster-rcnn part
cd Cell_detection/lib
make clean
make
cd ..
- Download models and put them in models folder
- Run the Detection code:
python3 tools/cell_detection.py
You can see an example output of software in following picture:
