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1. Perl-tools Perl-tools Public

   A collection of Perl scripts used for different applications.

   Perl

2. Python_tools Python_tools Public template

   Repository of python tools

   Python 1

3. RNAseq_pipeline_farhat RNAseq_pipeline_farhat Public

   RNAseq workflow for training.

   Shell

4. Script_wrappers Script_wrappers Public

   Selection of script working as wrappers to build pipelines mostly in bash

   Shell

5. SNP-calling-pipeline SNP-calling-pipeline Public

   Workflow to discover and annotate SNPs and InDels from a collection of Illumina-based sequencing datasets

   Perl

6. METATRANSCRIPTOMICS METATRANSCRIPTOMICS Public