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GBWTGraph v0.1

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@jltsiren jltsiren released this 06 Sep 00:17
· 450 commits to master since this release

This is the first standalone release of GBWTGraph. The main features are:

  • handlegraph::HandleGraph and handlegraph::SerializableHandleGraph interfaces.
  • A version of follow_edges() that only follows paths supported by the haplotypes.
  • Direct access to the internal sequence representation.
  • Graph construction from GFA 1.0 with no overlaps/containments and integer segment identifiers.
  • Minimizer index construction from the haplotypes.

This release requires GBWT v1.0.