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41 changes: 30 additions & 11 deletions docs/module_details/day0.html

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4 changes: 2 additions & 2 deletions docs/module_details/day1.html
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</div>
<div id="homework" class="section level2">
<h2>Homework</h2>
<p>🚨 <strong>SURVEYS</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20767/#!/">Best
<p>🚨 <strong>SURVEYS</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20749/#!/">Best
times for Office Hours and first impressions feedback</a></p>
<p>📝 <strong>HOMEWORK 1</strong>: <a href="https://app.dataquest.io/login?target-url=%2Fm%2F499%2Fintroduction-to-programming-in-r">Dataquest</a></p>
</div>
<div id="drop-boxes" class="section level2">
<h2>Drop Boxes</h2>
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Assignment
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Assignment
Drop Boxes</a></p>
<p><strong>Note</strong>: only people taking the course for credit must
turn in the assignments. However, we will evaluate all submitted
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</div>
<div id="homework" class="section level2">
<h2>Homework</h2>
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20767/#!/">Day
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20749/#!/">Day
2 check-in</a></p>
<p>📝 <strong>HOMEWORK 1</strong>: <a href="https://app.dataquest.io/login?target-url=%2Fm%2F499%2Fintroduction-to-programming-in-r">Dataquest</a></p>
</div>
<div id="drop-boxes" class="section level2">
<h2>Drop Boxes</h2>
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Assignment
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Assignment
Drop Boxes</a></p>
<p><strong>Note</strong>: only people taking the course for credit must
turn in the assignments. However, we will evaluate all submitted
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</div>
<div id="homework" class="section level2">
<h2>Homework</h2>
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20767/#!/">Day
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20749/#!/">Day
3 check-in</a></p>
<p>📝 <strong>HOMEWORK 1</strong>: <a href="https://app.dataquest.io/login?target-url=%2Fm%2F499%2Fintroduction-to-programming-in-r">Dataquest</a></p>
<p>📝 <strong>HOMEWORK 2</strong>: <a href="../../modules/HW/homework2.Rmd">Questions (Rmd)</a>, <a href="../../modules/HW/homework2.html">Questions (HTML)</a></p>
</div>
<div id="drop-boxes" class="section level2">
<h2>Drop Boxes</h2>
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Assignment
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Assignment
Drop Boxes</a></p>
<p><strong>Note</strong>: only people taking the course for credit must
turn in the assignments. However, we will evaluate all submitted
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4 changes: 2 additions & 2 deletions docs/module_details/day4.html
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Expand Up @@ -422,14 +422,14 @@ <h2>Material</h2>
</div>
<div id="homework" class="section level2">
<h2>Homework</h2>
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20767/#!/">Day
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20749/#!/">Day
4 check-in</a></p>
<p>📝 <strong>HOMEWORK 1</strong>: <a href="https://app.dataquest.io/login?target-url=%2Fm%2F499%2Fintroduction-to-programming-in-r">Dataquest</a></p>
<p>📝 <strong>HOMEWORK 2</strong>: <a href="../../modules/HW/homework2.Rmd">Questions (Rmd)</a>, <a href="../../modules/HW/homework2.html">Questions (HTML)</a></p>
</div>
<div id="drop-boxes" class="section level2">
<h2>Drop Boxes</h2>
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Assignment
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Assignment
Drop Boxes</a></p>
<p><strong>Note</strong>: only people taking the course for credit must
turn in the assignments. However, we will evaluate all submitted
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Expand Up @@ -418,14 +418,14 @@ <h2>Material</h2>
</div>
<div id="homework" class="section level2">
<h2>Homework</h2>
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20767/#!/">Day
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20749/#!/">Day
5 check-in</a></p>
<p>📝 <strong>HOMEWORK 1</strong>: <a href="https://app.dataquest.io/login?target-url=%2Fm%2F499%2Fintroduction-to-programming-in-r">Dataquest</a></p>
<p>📝 <strong>HOMEWORK 2</strong>: <a href="../../modules/HW/homework2.Rmd">Questions (Rmd)</a>, <a href="../../modules/HW/homework2.html">Questions (HTML)</a></p>
</div>
<div id="drop-boxes" class="section level2">
<h2>Drop Boxes</h2>
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Assignment
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Assignment
Drop Boxes</a></p>
<p><strong>Note</strong>: only people taking the course for credit must
turn in the assignments. However, we will evaluate all submitted
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4 changes: 2 additions & 2 deletions docs/module_details/day6.html
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Expand Up @@ -429,15 +429,15 @@ <h2>Material</h2>
</div>
<div id="homework" class="section level2">
<h2>Homework</h2>
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20767/#!/">Day
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20749/#!/">Day
6 check-in</a></p>
<p>📝 <strong>HOMEWORK 1</strong>: <a href="https://app.dataquest.io/login?target-url=%2Fm%2F499%2Fintroduction-to-programming-in-r">Dataquest</a></p>
<p>📝 <strong>HOMEWORK 2</strong>: <a href="../../modules/HW/homework2.Rmd">Questions (Rmd)</a>, <a href="../../modules/HW/homework2.html">Questions (HTML)</a></p>
<p>📝 <strong>HOMEWORK 3</strong>: <a href="../../modules/HW/homework3.Rmd">Questions (Rmd)</a>, <a href="../../modules/HW/homework3.html">Questions (HTML)</a></p>
</div>
<div id="drop-boxes" class="section level2">
<h2>Drop Boxes</h2>
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Assignment
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Assignment
Drop Boxes</a></p>
<p><strong>Note</strong>: only people taking the course for credit must
turn in the assignments. However, we will evaluate all submitted
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4 changes: 2 additions & 2 deletions docs/module_details/day7.html
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Expand Up @@ -415,15 +415,15 @@ <h2>Material</h2>
</div>
<div id="homework" class="section level2">
<h2>Homework</h2>
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20767/#!/">Day
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20749/#!/">Day
7 check-in</a></p>
<p>📝 <strong>HOMEWORK 1</strong>: <a href="https://app.dataquest.io/login?target-url=%2Fm%2F499%2Fintroduction-to-programming-in-r">Dataquest</a></p>
<p>📝 <strong>HOMEWORK 2</strong>: <a href="../../modules/HW/homework2.Rmd">Questions (Rmd)</a>, <a href="../../modules/HW/homework2.html">Questions (HTML)</a></p>
<p>📝 <strong>HOMEWORK 3</strong>: <a href="../../modules/HW/homework3.Rmd">Questions (Rmd)</a>, <a href="../../modules/HW/homework3.html">Questions (HTML)</a></p>
</div>
<div id="drop-boxes" class="section level2">
<h2>Drop Boxes</h2>
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Assignment
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Assignment
Drop Boxes</a></p>
<p><strong>Note</strong>: only people taking the course for credit must
turn in the assignments. However, we will evaluate all submitted
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Expand Up @@ -425,7 +425,7 @@ <h2>Material</h2>
</div>
<div id="homework" class="section level2">
<h2>Homework</h2>
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20767/#!/">Day
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20749/#!/">Day
8 check-in</a></p>
<p>📝 <strong>HOMEWORK 1</strong>: <a href="https://app.dataquest.io/login?target-url=%2Fm%2F499%2Fintroduction-to-programming-in-r">Dataquest</a></p>
<p>📝 <strong>HOMEWORK 2</strong>: <a href="../../modules/HW/homework2.Rmd">Questions (Rmd)</a>, <a href="../../modules/HW/homework2.html">Questions (HTML)</a></p>
Expand All @@ -435,7 +435,7 @@ <h2>Homework</h2>
</div>
<div id="drop-boxes" class="section level2">
<h2>Drop Boxes</h2>
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Assignment
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Assignment
Drop Boxes</a></p>
<p><strong>Note</strong>: only people taking the course for credit must
turn in the assignments. However, we will evaluate all submitted
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4 changes: 2 additions & 2 deletions docs/module_details/day9.html
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Expand Up @@ -416,7 +416,7 @@ <h2>Material</h2>
</div>
<div id="homework" class="section level2">
<h2>Homework</h2>
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20767/#!/">Day
<p>🚨 <strong>SURVEY</strong>: <a href="https://courseplus.jhu.edu/core/index.cfm/go/survey2:admin.home/coID/20749/#!/">Day
9 check-in and final thoughts</a></p>
<p>📝 <strong>HOMEWORK 1</strong>: <a href="https://app.dataquest.io/login?target-url=%2Fm%2F499%2Fintroduction-to-programming-in-r">Dataquest</a></p>
<p>📝 <strong>HOMEWORK 2</strong>: <a href="../../modules/HW/homework2.Rmd">Questions (Rmd)</a>, <a href="../../modules/HW/homework2.html">Questions (HTML)</a></p>
Expand All @@ -426,7 +426,7 @@ <h2>Homework</h2>
</div>
<div id="drop-boxes" class="section level2">
<h2>Drop Boxes</h2>
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Assignment
<p><a href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Assignment
Drop Boxes</a></p>
<p><strong>Note</strong>: only people taking the course for credit must
turn in the assignments. However, we will evaluate all submitted
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8 changes: 4 additions & 4 deletions help.html
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Expand Up @@ -394,16 +394,16 @@ <h2><strong>Why are my changes not taking effect? It’s making my results
<p>Here we are creating a new object from an existing one:</p>
<pre class="r"><code>new_rivers &lt;- sample(rivers, 5)
new_rivers</code></pre>
<pre><code>## [1] 545 500 890 900 444</code></pre>
<pre><code>## [1] 230 460 450 310 259</code></pre>
<p>Using just this will only print the result and not actually change
<code>new_rivers</code>:</p>
<pre class="r"><code>new_rivers + 1</code></pre>
<pre><code>## [1] 546 501 891 901 445</code></pre>
<pre><code>## [1] 231 461 451 311 260</code></pre>
<p>If we want to modify <code>new_rivers</code> and save that modified
version, then we need to reassign <code>new_rivers</code> like so:</p>
<pre class="r"><code>new_rivers &lt;- new_rivers + 1
new_rivers</code></pre>
<pre><code>## [1] 546 501 891 901 445</code></pre>
<pre><code>## [1] 231 461 451 311 260</code></pre>
<p>If we forget to reassign this can cause subsequent steps to not work
as expected because we will not be working with the data that has been
modified.</p>
Expand Down Expand Up @@ -473,7 +473,7 @@ <h2><strong>Error: object ‘X’ not found</strong></h2>
operator:</p>
<pre class="r"><code>rivers2 &lt;- new_rivers + 1
rivers2</code></pre>
<pre><code>## [1] 547 502 892 902 446</code></pre>
<pre><code>## [1] 232 462 452 312 261</code></pre>
<hr />
</div>
<div id="error-unexpected-in-error-unexpected-in-error-unexpected-x-in"
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16 changes: 9 additions & 7 deletions index.html
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Expand Up @@ -301,26 +301,28 @@ <h3>Instructors</h3>
</div>
<div id="teaching-assistant" class="section level3">
<h3>Teaching Assistant</h3>
<p>Rupshikha Sen (rsen6 at jhmi.edu)</p>
<p>Padmashri Saravanan (psarava1 at jhu.edu)</p>
<p><br></p>
</div>
</div>
<div id="class" class="section level2">
<h2>Class</h2>
<hr />
<ul>
<li>June 12-16 and 20-23, 2023 1:30PM-4:50PM on Zoom - In recognition of
<a href="https://en.wikipedia.org/wiki/Juneteenth">Juneteenth</a>, there
will be <strong>no class on Monday June 19th, 2023</strong>.</li>
<li>January 8-12 and 16-19, 2024 1:30PM-4:50PM on Zoom - In recognition
of <a
href="https://en.wikipedia.org/wiki/Martin_Luther_King_Jr._Day">Martin
Luther King Jr. Day</a>, there will be <strong>no class on Monday
January 15th, 2024</strong>.</li>
<li>Zoom link will be emailed prior to the first class.</li>
<li><a
href="https://jhudatascience.org/intro_to_r/modules/Setup/R_and_RStudio_installation.html">Installation
href="https://jhudatascience.org/intro_to_r/docs/module_details/day0.html">Installation
Instructions</a> - This is <strong>required</strong> before the course,
but we can help you on the first day (or before) if you have
trouble.</li>
<li>Slack Workspace invitation will be sent directly via email.</li>
<li><a
href="https://courseplus.jhu.edu/core/index.cfm/go/syl:syl.public.view/coid/20767/">CoursePlus
href="https://courseplus.jhu.edu/core/index.cfm/go/syl:syl.public.view/coid/20749/">CoursePlus
Website</a></li>
<li><a href="syllabus.html">Syllabus</a></li>
<li><a href="materials_schedule.html">Materials + Schedule</a></li>
Expand All @@ -335,7 +337,7 @@ <h2>Find an Error!?</h2>
associated with the class: <a
href="https://github.com/jhudsl/intro_to_r"
class="uri">https://github.com/jhudsl/intro_to_r</a></p>
<p>This page was last updated on 2023-10-31.</p>
<p>This page was last updated on 2024-01-03.</p>
<p style="text-align:center;">
<a rel="license" href="http://creativecommons.org/licenses/by-nc-sa/4.0/"><img alt="Creative Commons License" style="border-width:0" src="https://live.staticflickr.com/4557/26350808799_6f9c8bcaa2_b.jpg" height="150"/>
</a>
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10 changes: 5 additions & 5 deletions materials_schedule.html
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Expand Up @@ -275,13 +275,13 @@ <h1 class="title toc-ignore">Materials + Schedule</h1>


<p>In recognition of <a
href="https://en.wikipedia.org/wiki/Juneteenth">Juneteenth</a>, there
will be <strong>no class on Monday June 19th, 2023</strong>. There is an
assignment due before class to <a
href="modules/Setup/R_and_RStudio_installation.html">install
href="https://en.wikipedia.org/wiki/Martin_Luther_King_Jr._Day">Martin
Luther King Jr. Day</a>, there will be <strong>no class on Monday
January 15th, 2024</strong>. There is an assignment due before class to
<a href="modules/Setup/R_and_RStudio_installation.html">install
software</a> and we recommend completing HW 1 (uploading a screenshot
showing that you finished the Dataquest module indicated below) before
class, but all other assignments will be due June 30th at 11:59pm ET.
class, but all other assignments will be due January 24th at 11:59pm ET.
You are welcome to turn assignments in earlier if you wish.</p>
<p><br></p>
<div id="day-overview" class="section level2">
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28 changes: 16 additions & 12 deletions syllabus.html
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Expand Up @@ -278,7 +278,7 @@ <h1 class="title toc-ignore">Syllabus</h1>
<div id="overview" class="section level2">
<h2>Overview</h2>
<p><strong>Epi/Biostats Summer Institute - Introduction to R for Public
Health Researchers 140.604.79</strong></p>
Health Researchers 140.604.73</strong></p>
<p>This course will provide <em>“hands-on” training</em> for learning
how to analyze data in the R statistical software package. We will cover
data input/output, data management and manipulation, and how to make
Expand All @@ -305,10 +305,12 @@ <h2>Logistics</h2>
<div id="when" class="section level3">
<h3>When</h3>
<ul>
<li><strong>Dates:</strong> June 12-16 and 20-23, 2023 (In recognition
of <a href="https://en.wikipedia.org/wiki/Juneteenth">Juneteenth</a>,
there will be <strong>no class on Monday June 19th, 2023</strong>.)</li>
<li><strong>Time:</strong> 1:30 p.m. - 5:00 p.m. ET</li>
<li><strong>Dates:</strong> January 8-12 and 16-19, 2024 (In recognition
of <a
href="https://en.wikipedia.org/wiki/Martin_Luther_King_Jr._Day">Martin
Luther King Jr. Day</a>, there will be <strong>no class on Monday
January 15th, 2024</strong>.)</li>
<li><strong>Time:</strong> 1:30 p.m. - 4:50 p.m. ET</li>
</ul>
<p><br></p>
</div>
Expand All @@ -320,8 +322,8 @@ <h3>Where</h3>
class="uri">http://jhudatascience.org/intro_to_r/</a><br />
</li>
<li><strong>CoursePlus:</strong> <a
href="https://courseplus.jhu.edu/core/index.cfm/go/syl:syl.public.view/coid/20767/"
class="uri">https://courseplus.jhu.edu/core/index.cfm/go/syl:syl.public.view/coid/20767/</a></li>
href="https://courseplus.jhu.edu/core/index.cfm/go/syl:syl.public.view/coid/20749/"
class="uri">https://courseplus.jhu.edu/core/index.cfm/go/syl:syl.public.view/coid/20749/</a></li>
<li>Course lectures and labs will be online through Zoom</li>
<li>Zoom link and Slack link will be emailed to students</li>
<li>Communication will mainly occur through Slack</li>
Expand All @@ -336,8 +338,8 @@ <h3>Instruction Team</h3>
jhu.edu), <a href="https://www.avahoffman.com/">Ava Hoffman</a>
(ava.hoffman at jhu.edu), <a href="https://clifmckee.github.io/">Clifton
McKee</a> (cmckee7 at jhu.edu)</li>
<li><strong>Teaching Assistants:</strong> Rupshikha Sen (rsen6 at
jhmi.edu)</li>
<li><strong>Teaching Assistants:</strong> Padmashri Saravanan (psarava1
at jhu.edu)</li>
</ul>
<p><br></p>
</div>
Expand Down Expand Up @@ -426,7 +428,8 @@ <h2>Assignments</h2>
<p><br></p>
<div id="grading" class="section level3">
<h3>Grading</h3>
<p>All assignments are due <strong>June 30th at 11:59pm ET</strong>.</p>
<p>All assignments are due <strong>January 24th at 11:59pm
ET</strong>.</p>
<table>
<thead>
<tr class="header">
Expand Down Expand Up @@ -535,9 +538,10 @@ <h3>Final Project</h3>
</div>
<div id="submission" class="section level3">
<h3>Submission</h3>
<p>All assignments are due <strong>June 30th at 11:59pm ET</strong>.</p>
<p>All assignments are due <strong>January 24th at 11:59pm
ET</strong>.</p>
<p>Submit each assignment to the designated <a
href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20767/">Drop
href="https://courseplus.jhu.edu/core/index.cfm/go/db:main/coID/20749/">Drop
Box on CoursePlus</a>.</p>
<p><br></p>
</div>
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