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added required columns to docs #149

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merged 8 commits into from
Aug 9, 2023
Merged

added required columns to docs #149

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c59b509
added required columns to docs
denisovan31415 May 24, 2022
5709007
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denisovan31415 May 24, 2022
c54cf62
Merge branch 'main' into 121_lineplot_args@main
denisovan31415 May 25, 2022
8743221
updated teal_goshawk.R
denisovan31415 May 25, 2022
da13215
Added LOQFL
denisovan31415 May 25, 2022
8b6ae64
Merge branch 'main' into 121_lineplot_args@main
kpagacz May 27, 2022
6c81f0b
added more columns
denisovan31415 May 27, 2022
c2c9131
Merge branch 'main' into 121_lineplot_args@main
gogonzo Aug 9, 2023
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2 changes: 1 addition & 1 deletion R/tm_g_gh_lineplot.R
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Expand Up @@ -5,7 +5,7 @@
#' @inheritParams teal.widgets::standard_layout
#' @param label menu item label of the module in the teal app.
#' @param dataname analysis data passed to the data argument of teal init. E.g. ADaM structured
#' laboratory data frame ADLB.
#' laboratory data frame ADLB. This table must contain the columns `AVISITCD`, `BASE`, `BASE2`, `AVALU`, `LBSTRESC`
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there are others like LOQFL but this is documented as comments in the app.R code. whats best approach so as not to repeat in header across all modules and functions?
i seem to remember roxygen having ability to read in a template chunk of header info.

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I have included them in the teal_goshawk.R file

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@npaszty npaszty May 26, 2022 •
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@junlueZH
i believe the full list for goshawk/teal.goshawk is

goshawk expects the following variables: AVISITCD, AVALU, BASE2, CHG2, LBSTRESC, LOQFL, PCHG2

should also be in goshawk

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@npaszty added

#' @param param_var name of variable containing biomarker codes e.g. PARAMCD.
#' @param param biomarker selected.
#' @param param_var_label single name of variable in analysis data that includes parameter labels.
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2 changes: 1 addition & 1 deletion man/tm_g_gh_lineplot.Rd
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