Update documentation after module rename etc

toolbox/fieldofview.m.html → hytra/core/fieldofview.m.html

@@ -3,7 +3,7 @@
   <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
   <meta name="viewport" content="width=device-width, initial-scale=1, minimum-scale=1" />
 
-    <title>toolbox.fieldofview API documentation</title>
+    <title>hytra.core.fieldofview API documentation</title>
     <meta name="description" content="" />
 
   <link href='http://fonts.googleapis.com/css?family=Source+Sans+Pro:400,300' rel='stylesheet' type='text/css'>
@@ -1041,12 +1041,12 @@ <h1>Index</h1>
     <li class="set"><h3><a href="#header-classes">Classes</a></h3>
       <ul>
         <li class="mono">
-        <span class="class_name"><a href="#toolbox.fieldofview.FieldOfView">FieldOfView</a></span>
+        <span class="class_name"><a href="#hytra.core.fieldofview.FieldOfView">FieldOfView</a></span>
 
 
   <ul>
-    <li class="mono"><a href="#toolbox.fieldofview.FieldOfView.__init__">__init__</a></li>
-    <li class="mono"><a href="#toolbox.fieldofview.FieldOfView.spatial_distance_to_border">spatial_distance_to_border</a></li>
+    <li class="mono"><a href="#hytra.core.fieldofview.FieldOfView.__init__">__init__</a></li>
+    <li class="mono"><a href="#hytra.core.fieldofview.FieldOfView.spatial_distance_to_border">spatial_distance_to_border</a></li>
   </ul>
 
         </li>
@@ -1064,11 +1064,11 @@ <h1>Index</h1>
 
 
   <header id="section-intro">
-  <h1 class="title"><span class="name">toolbox.fieldofview</span> module</h1>
+  <h1 class="title"><span class="name">hytra.core.fieldofview</span> module</h1>
 
 
-  <p class="source_link"><a href="javascript:void(0);" onclick="toggle('source-toolbox.fieldofview', this);">Show source &equiv;</a></p>
-  <div id="source-toolbox.fieldofview" class="source">
+  <p class="source_link"><a href="javascript:void(0);" onclick="toggle('source-hytra.core.fieldofview', this);">Show source &equiv;</a></p>
+  <div id="source-hytra.core.fieldofview" class="source">
     <div class="codehilite"><pre><span></span><span class="kn">import</span> <span class="nn">numpy</span> <span class="kn">as</span> <span class="nn">np</span>
 
 <span class="k">class</span> <span class="nc">FieldOfView</span><span class="p">:</span>
@@ -1166,14 +1166,14 @@ <h1 class="title"><span class="name">toolbox.fieldofview</span> module</h1>
     <h2 class="section-title" id="header-classes">Classes</h2>
 
       <div class="item">
-      <p id="toolbox.fieldofview.FieldOfView" class="name">class <span class="ident">FieldOfView</span></p>
+      <p id="hytra.core.fieldofview.FieldOfView" class="name">class <span class="ident">FieldOfView</span></p>
 
 
     <div class="desc"><p>Replacement for pgmlink's field of view by simply copy'n'pasting it and adjusting so that it works.
 FIXME: Could be made much nicer in python, using more Numpy functionality...</p></div>
   <div class="source_cont">
-  <p class="source_link"><a href="javascript:void(0);" onclick="toggle('source-toolbox.fieldofview.FieldOfView', this);">Show source &equiv;</a></p>
-  <div id="source-toolbox.fieldofview.FieldOfView" class="source">
+  <p class="source_link"><a href="javascript:void(0);" onclick="toggle('source-hytra.core.fieldofview.FieldOfView', this);">Show source &equiv;</a></p>
+  <div id="source-hytra.core.fieldofview.FieldOfView" class="source">
     <div class="codehilite"><pre><span></span><span class="k">class</span> <span class="nc">FieldOfView</span><span class="p">:</span>
     <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    Replacement for pgmlink&#39;s field of view by simply copy&#39;n&#39;pasting it and adjusting so that it works.</span>
@@ -1266,12 +1266,12 @@ <h2 class="section-title" id="header-classes">Classes</h2>
       <div class="class">
           <h3>Ancestors (in MRO)</h3>
           <ul class="class_list">
-          <li><a href="#toolbox.fieldofview.FieldOfView">FieldOfView</a></li>
+          <li><a href="#hytra.core.fieldofview.FieldOfView">FieldOfView</a></li>
           </ul>
           <h3>Methods</h3>
 
   <div class="item">
-    <div class="name def" id="toolbox.fieldofview.FieldOfView.__init__">
+    <div class="name def" id="hytra.core.fieldofview.FieldOfView.__init__">
     <p>def <span class="ident">__init__</span>(</p><p>self, lt, lx, ly, lz, ut, ux, uy, uz)</p>
     </div>
 
@@ -1280,8 +1280,8 @@ <h3>Methods</h3>
 
     <div class="desc"><p>Initialize this field of view with lower (l) and upper (u) values for t,x,y,z.</p></div>
   <div class="source_cont">
-  <p class="source_link"><a href="javascript:void(0);" onclick="toggle('source-toolbox.fieldofview.FieldOfView.__init__', this);">Show source &equiv;</a></p>
-  <div id="source-toolbox.fieldofview.FieldOfView.__init__" class="source">
+  <p class="source_link"><a href="javascript:void(0);" onclick="toggle('source-hytra.core.fieldofview.FieldOfView.__init__', this);">Show source &equiv;</a></p>
+  <div id="source-hytra.core.fieldofview.FieldOfView.__init__" class="source">
     <div class="codehilite"><pre><span></span><span class="k">def</span> <span class="nf">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">lt</span><span class="p">,</span> <span class="n">lx</span><span class="p">,</span> <span class="n">ly</span><span class="p">,</span> <span class="n">lz</span><span class="p">,</span> <span class="n">ut</span><span class="p">,</span> <span class="n">ux</span><span class="p">,</span> <span class="n">uy</span><span class="p">,</span> <span class="n">uz</span><span class="p">):</span>
     <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    Initialize this field of view with lower (l) and upper (u) values for t,x,y,z.</span>
@@ -1297,7 +1297,7 @@ <h3>Methods</h3>
 
 
   <div class="item">
-    <div class="name def" id="toolbox.fieldofview.FieldOfView.spatial_distance_to_border">
+    <div class="name def" id="hytra.core.fieldofview.FieldOfView.spatial_distance_to_border">
     <p>def <span class="ident">spatial_distance_to_border</span>(</p><p>self, t, x, y, z, relative=False)</p>
     </div>
 
@@ -1308,8 +1308,8 @@ <h3>Methods</h3>
 we take the planes with Z upper bound set to 1.0
 and return the distances to the 4 corresponding planes</p></div>
   <div class="source_cont">
-  <p class="source_link"><a href="javascript:void(0);" onclick="toggle('source-toolbox.fieldofview.FieldOfView.spatial_distance_to_border', this);">Show source &equiv;</a></p>
-  <div id="source-toolbox.fieldofview.FieldOfView.spatial_distance_to_border" class="source">
+  <p class="source_link"><a href="javascript:void(0);" onclick="toggle('source-hytra.core.fieldofview.FieldOfView.spatial_distance_to_border', this);">Show source &equiv;</a></p>
+  <div id="source-hytra.core.fieldofview.FieldOfView.spatial_distance_to_border" class="source">
     <div class="codehilite"><pre><span></span><span class="k">def</span> <span class="nf">spatial_distance_to_border</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">t</span><span class="p">,</span> <span class="n">x</span><span class="p">,</span> <span class="n">y</span><span class="p">,</span> <span class="n">z</span><span class="p">,</span> <span class="n">relative</span><span class="o">=</span><span class="bp">False</span><span class="p">):</span>
     <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    distance to 6 cuboid planes, in the 2D case where Z=0,</span>