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diff --git a/.nojekyll b/.nojekyll
@@ -1 +1 @@
-5b08e23e
+0e5f4d4d
diff --git a/develop/colabfold.html b/develop/colabfold.html
@@ -105,7 +105,7 @@ <h1 class="title">ColabFold</h1>
     <div>
     <div class="quarto-title-meta-heading">Modified</div>
     <div class="quarto-title-meta-contents">
-      <p class="date-modified">October 4, 2024</p>
+      <p class="date-modified">October 7, 2024</p>
     </div>
   </div>
 

diff --git a/develop/coursematerials.html b/develop/coursematerials.html
@@ -6,7 +6,7 @@
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
-<meta name="dcterms.date" content="2024-10-04">
+<meta name="dcterms.date" content="2024-10-07">
 
 <title>Course Materials – Clinical Proteomics</title>
 <style>
@@ -111,7 +111,7 @@ <h1 class="title">Course Materials</h1>
     <div>
     <div class="quarto-title-meta-heading">Published</div>
     <div class="quarto-title-meta-contents">
-      <p class="date">October 4, 2024</p>
+      <p class="date">October 7, 2024</p>
     </div>
   </div>
 

diff --git a/develop/fragpipe.html b/develop/fragpipe.html
@@ -6,7 +6,7 @@
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
-<meta name="dcterms.date" content="2024-10-04">
+<meta name="dcterms.date" content="2024-10-07">
 
 <title>FragPipe – Clinical Proteomics</title>
 <style>
@@ -104,7 +104,7 @@ <h1 class="title">FragPipe</h1>
     <div>
     <div class="quarto-title-meta-heading">Published</div>
     <div class="quarto-title-meta-contents">
-      <p class="date">October 4, 2024</p>
+      <p class="date">October 7, 2024</p>
     </div>
   </div>
 

diff --git a/develop/gettingstarted.html b/develop/gettingstarted.html
@@ -6,7 +6,7 @@
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
-<meta name="dcterms.date" content="2024-10-04">
+<meta name="dcterms.date" content="2024-10-07">
 
 <title>Getting Started – Clinical Proteomics</title>
 <style>
@@ -113,7 +113,7 @@ <h1 class="title">Getting Started</h1>
     <div>
     <div class="quarto-title-meta-heading">Published</div>
     <div class="quarto-title-meta-contents">
-      <p class="date">October 4, 2024</p>
+      <p class="date">October 7, 2024</p>
     </div>
   </div>
 

diff --git a/develop/index.html b/develop/index.html
@@ -6,7 +6,7 @@
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
-<meta name="dcterms.date" content="2024-10-04">
+<meta name="dcterms.date" content="2024-09-11">
 
 <title>Clinical Proteomics</title>
 <style>
@@ -70,47 +70,44 @@
 }</script>
 
 
+<link rel="stylesheet" href="css/styles.css">
 </head>
 
 <body>
 
 <div id="quarto-search-results"></div>
 <!-- content -->
-<div id="quarto-content" class="quarto-container page-columns page-rows-contents page-layout-article">
+<div id="quarto-content" class="quarto-container page-columns page-rows-contents page-layout-full">
 <!-- sidebar -->
 <!-- margin-sidebar -->
-    <div id="quarto-margin-sidebar" class="sidebar margin-sidebar">
-        <nav id="TOC" role="doc-toc" class="toc-active">
-    <h2 id="toc-title">On this page</h2>
-
-  <ul>
-  <li><a href="#clinical-proteomics" id="toc-clinical-proteomics" class="nav-link active" data-scroll-target="#clinical-proteomics">Clinical Proteomics</a>
-  <ul class="collapse">
-  <li><a href="#learning-clinical-proteomics-with-the-sandbox" id="toc-learning-clinical-proteomics-with-the-sandbox" class="nav-link" data-scroll-target="#learning-clinical-proteomics-with-the-sandbox">Learning Clinical Proteomics with the Sandbox</a></li>
-  </ul></li>
-  </ul>
-</nav>
-    </div>
+
 <!-- main -->
-<main class="content" id="quarto-document-content">
+<main class="content column-page" id="quarto-document-content">
 
 <header id="title-block-header" class="quarto-title-block default">
 <div class="quarto-title">
 <h1 class="title">Clinical Proteomics</h1>
+<p class="subtitle lead">Clinical proteomics on Ucloud with the sandbox</p>
 </div>
 
 
 
-<div class="quarto-title-meta">
+<div class="quarto-title-meta column-page">
 
 
     <div>
     <div class="quarto-title-meta-heading">Published</div>
     <div class="quarto-title-meta-contents">
-      <p class="date">October 4, 2024</p>
+      <p class="date">September 11, 2024</p>
     </div>
   </div>
 
+    <div>
+    <div class="quarto-title-meta-heading">Modified</div>
+    <div class="quarto-title-meta-contents">
+      <p class="date-modified">October 7, 2024</p>
+    </div>
+  </div>
 
   </div>
 
@@ -119,34 +116,26 @@ <h1 class="title">Clinical Proteomics</h1>
 </header>
 
 
-<!--
-# Put above to hide navigation (left), toc (right) or footer (bottom)
-
-hide:
-  - navigation 
-  - toc
-  - footer 
-
-# You should hide the navigation if there are no subsections
-# You should hide the Table of Contents if there are no important titles
--->
 <center>
 <section id="clinical-proteomics" class="level1">
 <h1>Clinical Proteomics</h1>
 </section></center>
-<p><strong>Updated:</strong> 2024-17-06</p>
 <p>Discover the world of proteomics with the Clinical Proteomics module of the Sandbox, offering the Proteomics Sandbox app on UCloud - an accessible resource for biomedical students and non-computational researchers. With a user-friendly interface and a lightweight clone feature, the app is perfect for those without extensive coding knowledge, providing a stable platform for proteomics software tools. You can also learn to predict protein structures based on sequence data with the independent ColabFold workshop, available on UCloud. This hands-on experience offers insights into the exciting field of proteomics analysis and is accessible for all UCloud-users.</p>
 <p>New course materials are being developed constantly to enhance your education and training in clinical proteomics data analysis. Stay tuned!</p>
-<p>!!! danger “Disclaimer” Currently, the educational material on proteomics is only available at UCloud, making it only accessible for UCloud-users.</p>
-<p><br></p>
-<!-- AUTHORS -->
-<!-- Format: [author name](link to author page){ .md-button } -->
-<h4 class="anchored">
-Authors
-</h4>
-<p>[cards cols=“4”(./develop/cards/cards.yaml)]</p>
-<hr>
-<p>!!! warning “Requirements” - Access to UCloud and sufficient resources to run the application - Basic computational knowledge, including familiarity with the UCloud environment - Familiarity with proteomics analysis techniques</p>
+<div class="callout callout-style-default callout-warning callout-titled" title="Disclaimer and requirements">
+<div class="callout-header d-flex align-content-center">
+<div class="callout-icon-container">
+<i class="callout-icon"></i>
+</div>
+<div class="callout-title-container flex-fill">
+Disclaimer and requirements
+</div>
+</div>
+<div class="callout-body-container callout-body">
+<p>Currently, the educational material on proteomics is only available at UCloud, making it only accessible for UCloud-users.</p>
+<p>“Requirements” - Access to UCloud and sufficient resources to run the application - Basic computational knowledge, including familiarity with the UCloud environment - Familiarity with proteomics analysis techniques</p>
+</div>
+</div>
 <section id="learning-clinical-proteomics-with-the-sandbox" class="level2">
 <h2 class="anchored" data-anchor-id="learning-clinical-proteomics-with-the-sandbox">Learning Clinical Proteomics with the Sandbox</h2>
 <p>The Clinical Proteomics Module offers a comprehensive resource for learning and practicing clinical proteomics data analysis. The module consists of the following components:</p>

diff --git a/develop/setup.html b/develop/setup.html
@@ -6,7 +6,7 @@
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
-<meta name="dcterms.date" content="2024-10-04">
+<meta name="dcterms.date" content="2024-10-07">
 
 <title>Setup – Clinical Proteomics</title>
 <style>
@@ -107,7 +107,7 @@ <h1 class="title">Setup</h1>
     <div>
     <div class="quarto-title-meta-heading">Published</div>
     <div class="quarto-title-meta-contents">
-      <p class="date">October 4, 2024</p>
+      <p class="date">October 7, 2024</p>
     </div>
   </div>
 

diff --git a/develop/teachingmodule.html b/develop/teachingmodule.html
@@ -7,7 +7,7 @@
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
 <meta name="author" content="Jacob Fredegaard Hansen">
-<meta name="dcterms.date" content="2024-10-04">
+<meta name="dcterms.date" content="2024-10-07">
 
 <title>Breast Cancer Proteomics Module – Clinical Proteomics</title>
 <style>
@@ -167,7 +167,7 @@ <h1 class="title">Breast Cancer Proteomics Module</h1>
     <div>
     <div class="quarto-title-meta-heading">Published</div>
     <div class="quarto-title-meta-contents">
-      <p class="date">October 4, 2024</p>
+      <p class="date">October 7, 2024</p>
     </div>
   </div>
 

diff --git a/search.json b/search.json
@@ -95,7 +95,7 @@
     "href": "develop/index.html",
     "title": "Clinical Proteomics",
     "section": "",
-    "text": "Updated: 2024-17-06\nDiscover the world of proteomics with the Clinical Proteomics module of the Sandbox, offering the Proteomics Sandbox app on UCloud - an accessible resource for biomedical students and non-computational researchers. With a user-friendly interface and a lightweight clone feature, the app is perfect for those without extensive coding knowledge, providing a stable platform for proteomics software tools. You can also learn to predict protein structures based on sequence data with the independent ColabFold workshop, available on UCloud. This hands-on experience offers insights into the exciting field of proteomics analysis and is accessible for all UCloud-users.\nNew course materials are being developed constantly to enhance your education and training in clinical proteomics data analysis. Stay tuned!\n!!! danger “Disclaimer” Currently, the educational material on proteomics is only available at UCloud, making it only accessible for UCloud-users.\n[cards cols=“4”(./develop/cards/cards.yaml)]\n!!! warning “Requirements” - Access to UCloud and sufficient resources to run the application - Basic computational knowledge, including familiarity with the UCloud environment - Familiarity with proteomics analysis techniques"
+    "text": "Discover the world of proteomics with the Clinical Proteomics module of the Sandbox, offering the Proteomics Sandbox app on UCloud - an accessible resource for biomedical students and non-computational researchers. With a user-friendly interface and a lightweight clone feature, the app is perfect for those without extensive coding knowledge, providing a stable platform for proteomics software tools. You can also learn to predict protein structures based on sequence data with the independent ColabFold workshop, available on UCloud. This hands-on experience offers insights into the exciting field of proteomics analysis and is accessible for all UCloud-users.\nNew course materials are being developed constantly to enhance your education and training in clinical proteomics data analysis. Stay tuned!"
   },
   {
     "objectID": "develop/index.html#learning-clinical-proteomics-with-the-sandbox",

diff --git a/sitemap.xml b/sitemap.xml
@@ -2,38 +2,38 @@
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   <url>
     <loc>https://hds-sandbox.github.io/proteomics-sandbox/develop/setup.html</loc>
-    <lastmod>2024-10-04T09:39:18.833Z</lastmod>
+    <lastmod>2024-10-07T11:24:37.482Z</lastmod>
   </url>
   <url>
     <loc>https://hds-sandbox.github.io/proteomics-sandbox/develop/gettingstarted.html</loc>
-    <lastmod>2024-10-04T09:39:18.808Z</lastmod>
+    <lastmod>2024-10-07T11:24:37.456Z</lastmod>
   </url>
   <url>
     <loc>https://hds-sandbox.github.io/proteomics-sandbox/develop/fragpipe.html</loc>
-    <lastmod>2024-10-04T09:39:18.808Z</lastmod>
+    <lastmod>2024-10-07T11:24:37.456Z</lastmod>
   </url>
   <url>
     <loc>https://hds-sandbox.github.io/proteomics-sandbox/develop/teachingmodule.html</loc>
-    <lastmod>2024-10-04T09:39:18.834Z</lastmod>
+    <lastmod>2024-10-07T11:24:37.482Z</lastmod>
   </url>
   <url>
     <loc>https://hds-sandbox.github.io/proteomics-sandbox/develop/index.html</loc>
-    <lastmod>2024-10-04T09:39:18.829Z</lastmod>
+    <lastmod>2024-10-07T11:24:37.477Z</lastmod>
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   <url>
     <loc>https://hds-sandbox.github.io/proteomics-sandbox/develop/colabfold.html</loc>
-    <lastmod>2024-10-04T09:39:18.808Z</lastmod>
+    <lastmod>2024-10-07T11:24:37.456Z</lastmod>
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   <url>
     <loc>https://hds-sandbox.github.io/proteomics-sandbox/develop/contributors.html</loc>
-    <lastmod>2024-10-04T09:39:18.808Z</lastmod>
+    <lastmod>2024-10-07T11:24:37.456Z</lastmod>
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   <url>
     <loc>https://hds-sandbox.github.io/proteomics-sandbox/develop/coursematerials.html</loc>
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   <url>
     <loc>https://hds-sandbox.github.io/proteomics-sandbox/develop/keywords.html</loc>
-    <lastmod>2024-10-04T09:39:18.831Z</lastmod>
+    <lastmod>2024-10-07T11:24:37.479Z</lastmod>
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