[] reported by reviewdog 🐶 Potential broken box. A None was opened on 309, but not closed on line 310 Raw Output: topics/assembly/tutorials/vgp_workflow_training/tutorial.md:310: Potential broken box. A None was opened on 309, but not closed on line 310

[rdjsonl] reported by reviewdog 🐶 Missing both a DOI and a URL. Please add one of the two. Raw Output: {"message":"Missing both a DOI and a URL. Please add one of the two.","location":{"path":"./topics/assembly/tutorials/vgp_workflow_training/tutorial.bib","range":{"start":{"line":250,"column":1},"end":{"line":250,"column":21}}},"severity":"ERROR","code":{"value":"GTN:012","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn012"}}

[rdjsonl] reported by reviewdog 🐶 Please use the link function to link to other pages within the GTN. It helps us ensure that all links are correct Raw Output: {"message":"Please use the link function to link to other pages within the GTN. It helps us ensure that all links are correct","location":{"path":"./topics/assembly/tutorials/vgp_workflow_training/tutorial.md","range":{"start":{"line":68,"column":37},"end":{"line":68,"column":109}}},"severity":"ERROR","code":{"value":"GTN:003","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn003"},"suggestions":[{"text":"{% link .md %}","range":{"start":{"line":68,"column":37},"end":{"line":68,"column":109}}}]}

[rdjsonl] reported by reviewdog 🐶 You have skipped a heading level, please correct this. <details><summary>Listing of Heading Levels</summary> ``` #### Step-by-step #### Everything together ``` </details> Raw Output: {"message":"You have skipped a heading level, please correct this.\n<details><summary>Listing of Heading Levels</summary>\n\n```\n#### Step-by-step\n#### Everything together\n```\n</details>","location":{"path":"./faqs/galaxy/collections_build_list.md","range":{"start":{"line":9,"column":1},"end":{"line":9,"column":5}}},"severity":"ERROR","code":{"value":"GTN:028","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn028"},"suggestions":[{"text":"##","range":{"start":{"line":9,"column":1},"end":{"line":9,"column":5}}}]}

Process completed with exit code 1.

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-python@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

[rdjsonl] reported by reviewdog 🐶 Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others. Raw Output: {"message":"Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.","location":{"path":"./topics/assembly/tutorials/vgp_workflow_training/tutorial.md","range":{"start":{"line":308,"column":19},"end":{"line":308,"column":298}}},"severity":"WARNING","code":{"value":"GTN:002","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn002"},"suggestions":[{"text":"","range":{"start":{"line":308,"column":19},"end":{"line":308,"column":298}}}]}

[rdjsonl] reported by reviewdog 🐶 This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is. Raw Output: {"message":"This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is.","location":{"path":"./topics/genome-annotation/tutorials/crispr-screen/tutorial.md","range":{"start":{"line":409,"column":3},"end":{"line":409,"column":20}}},"severity":"WARNING","code":{"value":"GTN:020","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn020"},"suggestions":[{"text":"### Gene Summary file","range":{"start":{"line":409,"column":3},"end":{"line":409,"column":20}}}]}

[rdjsonl] reported by reviewdog 🐶 This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is. Raw Output: {"message":"This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is.","location":{"path":"./topics/genome-annotation/tutorials/crispr-screen/tutorial.md","range":{"start":{"line":433,"column":3},"end":{"line":433,"column":21}}},"severity":"WARNING","code":{"value":"GTN:020","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn020"},"suggestions":[{"text":"### sgRNA summary file","range":{"start":{"line":433,"column":3},"end":{"line":433,"column":21}}}]}