removed unused file

examples/surface_mesh/cadquery_compound.py

@@ -17,19 +17,12 @@
 cq_shape_1 = r.extrude(-1)
 
 s2 = cq.Workplane("XY")
-r2 = (
-    s2.lineTo(3.0, 0)
-    .lineTo(3.0, 1.0)
-    .spline(spline_points, includeCurrent=True)
-    .close()
-)
+r2 = s2.lineTo(3.0, 0).lineTo(3.0, 1.0).spline(spline_points, includeCurrent=True).close()
 cq_shape_2 = r2.extrude(1)
 
 
 compound_of_shapes = cq.Compound.makeCompound([cq_shape_1.val(), cq_shape_2.val()])
 
 my_model = CadToDagmc()
-my_model.add_cadquery_object(
-    cadquery_object=compound_of_shapes, material_tags=["mat1", "mat2"]
-)
+my_model.add_cadquery_object(cadquery_object=compound_of_shapes, material_tags=["mat1", "mat2"])
 my_model.export_dagmc_h5m_file(max_mesh_size=0.2, min_mesh_size=0.1)

examples/surface_mesh/multiple_cadquery_objects.py

@@ -8,7 +8,5 @@
 
 my_model = CadToDagmc()
 my_model.add_cadquery_object(cadquery_object=box, material_tags=["mat1"])
-my_model.add_cadquery_object(
-    cadquery_object=box_with_round_corners, material_tags=["mat2"]
-)
+my_model.add_cadquery_object(cadquery_object=box_with_round_corners, material_tags=["mat2"])
 my_model.export_dagmc_h5m_file()

examples/surface_mesh/single_stp_file.py

@@ -12,12 +12,7 @@
     (0.5, 1.0),
     (0, 1.0),
 ]
-r = (
-    result.lineTo(3.0, 0)
-    .lineTo(3.0, 1.0)
-    .spline(spline_points, includeCurrent=True)
-    .close()
-)
+r = result.lineTo(3.0, 0).lineTo(3.0, 1.0).spline(spline_points, includeCurrent=True).close()
 result = r.extrude(1.5)
 assembly = cq.Assembly()
 assembly.add(result)

examples/unstrucutred_volume_mesh/curved_cadquery_object_to_dagmc_volume_mesh.py

@@ -59,6 +59,4 @@ def gear(t, r1=4, r2=1):
 my_model.add_cadquery_object(result)
 my_model.add_cadquery_object(result2)
 
-my_model.export_unstructured_mesh_file(
-    filename="umesh.h5m", max_mesh_size=1, min_mesh_size=0.1
-)
+my_model.export_unstructured_mesh_file(filename="umesh.h5m", max_mesh_size=1, min_mesh_size=0.1)

examples/unstrucutred_volume_mesh/simulate_unstrucutred_volume_mesh_with_openmc.py

@@ -65,7 +65,5 @@
 centroids = umesh_from_sp.centroids
 mesh_vols = umesh_from_sp.volumes
 
-flux_mean = tally_result.get_values(scores=["flux"], value="mean").reshape(
-    umesh_from_sp.dimension
-)
+flux_mean = tally_result.get_values(scores=["flux"], value="mean").reshape(umesh_from_sp.dimension)
 umesh_from_sp.write_data_to_vtk(filename="tally.vtk", datasets={"mean": flux_mean})

src/cad_to_dagmc/core.py

@@ -66,9 +66,7 @@ def _vertices_to_h5m(
         typing.Iterable[typing.Tuple[float, float, float]],
         typing.Iterable["cadquery.occ_impl.geom.Vector"],
     ],
-    triangles_by_solid_by_face: typing.Iterable[
-        typing.Iterable[typing.Tuple[int, int, int]]
-    ],
+    triangles_by_solid_by_face: typing.Iterable[typing.Iterable[typing.Tuple[int, int, int]]],
     material_tags: typing.Iterable[str],
     h5m_filename="dagmc.h5m",
     implicit_complement_material_tag=None,
@@ -88,11 +86,7 @@ def _vertices_to_h5m(
         raise ValueError(msg)
 
     # limited attribute checking to see if user passed in a list of CadQuery vectors
-    if (
-        hasattr(vertices[0], "x")
-        and hasattr(vertices[0], "y")
-        and hasattr(vertices[0], "z")
-    ):
+    if hasattr(vertices[0], "x") and hasattr(vertices[0], "y") and hasattr(vertices[0], "z"):
         vertices_floats = []
         for vert in vertices:
             vertices_floats.append((vert.x, vert.y, vert.z))
@@ -142,9 +136,7 @@ def _vertices_to_h5m(
                 if len(face_ids_with_solid_ids[face_id]) == 2:
                     other_solid_id = face_ids_with_solid_ids[face_id][1]
                     other_volume_set = volume_sets_by_solid_id[other_solid_id]
-                    sense_data = np.array(
-                        [other_volume_set, volume_set], dtype="uint64"
-                    )
+                    sense_data = np.array([other_volume_set, volume_set], dtype="uint64")
                 else:
                     sense_data = np.array([volume_set, 0], dtype="uint64")
 
@@ -283,8 +275,7 @@ def mesh_to_vertices_and_triangles(
             for nodeTag in nodeTags:
                 shifted_node_tags.append(nodeTag - 1)
             grouped_node_tags = [
-                shifted_node_tags[i : i + n]
-                for i in range(0, len(shifted_node_tags), n)
+                shifted_node_tags[i : i + n] for i in range(0, len(shifted_node_tags), n)
             ]
             nodes_in_each_surface[surface] = grouped_node_tags
         triangles_by_solid_by_face[vol_id] = nodes_in_each_surface
@@ -426,9 +417,7 @@ def add_stp_file(
             scaled_part = part
         else:
             scaled_part = part.scale(scale_factor)
-        self.add_cadquery_object(
-            cadquery_object=scaled_part, material_tags=material_tags
-        )
+        self.add_cadquery_object(cadquery_object=scaled_part, material_tags=material_tags)
 
     def add_cadquery_object(
         self,
@@ -452,9 +441,7 @@ def add_cadquery_object(
         if isinstance(cadquery_object, cq.assembly.Assembly):
             cadquery_object = cadquery_object.toCompound()
 
-        if isinstance(
-            cadquery_object, (cq.occ_impl.shapes.Compound, cq.occ_impl.shapes.Solid)
-        ):
+        if isinstance(cadquery_object, (cq.occ_impl.shapes.Compound, cq.occ_impl.shapes.Solid)):
             iterable_solids = cadquery_object.Solids()
         else:
             iterable_solids = cadquery_object.val().Solids()
@@ -565,9 +552,7 @@ def export_dagmc_h5m_file(
         for part in self.parts:
             assembly.add(part)
 
-        imprinted_assembly, imprinted_solids_with_org_id = cq.occ_impl.assembly.imprint(
-            assembly
-        )
+        imprinted_assembly, imprinted_solids_with_org_id = cq.occ_impl.assembly.imprint(assembly)
 
         original_ids = _get_ids_from_assembly(assembly)
         scrambled_ids = _get_ids_from_imprinted_assembly(imprinted_solids_with_org_id)

tests/test_file_creation.py

@@ -142,26 +142,14 @@ def test_cq_compound():
     ]
 
     s = cq.Workplane("XY")
-    r = (
-        s.lineTo(3.0, 0)
-        .lineTo(3.0, 1.0)
-        .spline(spline_points, includeCurrent=True)
-        .close()
-    )
+    r = s.lineTo(3.0, 0).lineTo(3.0, 1.0).spline(spline_points, includeCurrent=True).close()
     cq_shape_1 = r.extrude(-1)
 
     s2 = cq.Workplane("XY")
-    r2 = (
-        s2.lineTo(3.0, 0)
-        .lineTo(3.0, 1.0)
-        .spline(spline_points, includeCurrent=True)
-        .close()
-    )
+    r2 = s2.lineTo(3.0, 0).lineTo(3.0, 1.0).spline(spline_points, includeCurrent=True).close()
     cq_shape_2 = r2.extrude(1)
 
-    compound_of_workplanes = cq.Compound.makeCompound(
-        [cq_shape_1.val(), cq_shape_2.val()]
-    )
+    compound_of_workplanes = cq.Compound.makeCompound([cq_shape_1.val(), cq_shape_2.val()])
 
     my_model = CadToDagmc()
     my_model.add_cadquery_object(
@@ -216,9 +204,7 @@ def test_gmsh_mesh_with_multi_volume_not_touching():
     gmsh_mesh_files = [
         "tests/two_disconnected_cubes.msh",
     ]
-    for stp_file, mat_tags, gmsh_mesh_file in zip(
-        stp_files, material_tags, gmsh_mesh_files
-    ):
+    for stp_file, mat_tags, gmsh_mesh_file in zip(stp_files, material_tags, gmsh_mesh_files):
         my_model = CadToDagmc()
         my_model.add_stp_file(filename=stp_file, material_tags=mat_tags)
 
@@ -238,9 +224,7 @@ def test_gmsh_mesh_with_multi_volume_touching():
         "tests/multi_volume_cylinders.msh",
         "tests/two_connected_cubes.msh",
     ]
-    for stp_file, mat_tags, gmsh_mesh_file in zip(
-        stp_files, material_tags, gmsh_mesh_files
-    ):
+    for stp_file, mat_tags, gmsh_mesh_file in zip(stp_files, material_tags, gmsh_mesh_files):
         my_model = CadToDagmc()
         my_model.add_stp_file(stp_file, material_tags=mat_tags)