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Initialize Protein-->Tensor Functions #20

Merged
merged 14 commits into from
Nov 1, 2024
804 changes: 794 additions & 10 deletions Cargo.lock

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1 change: 1 addition & 0 deletions Cargo.toml
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,7 @@ members = [
"ferritin-pymol",
"ferritin-bevy",
"ferritin-molviewspec",
"ferritin-featurizers",
]
resolver = "2"

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294 changes: 0 additions & 294 deletions ferritin-core/src/core/featureizer.rs

This file was deleted.

2 changes: 1 addition & 1 deletion ferritin-core/src/core/mod.rs
Original file line number Diff line number Diff line change
@@ -1,12 +1,12 @@
mod atomcollection;
mod bonds;
mod conversions;
mod featureizer;
mod info;
mod residue;
mod selection;
mod test_utilities;

pub use atomcollection::AtomCollection;
pub use bonds::{Bond, BondOrder};
pub use info::is_amino_acid;
pub use selection::Selection;
2 changes: 1 addition & 1 deletion ferritin-core/src/lib.rs
Original file line number Diff line number Diff line change
@@ -1,3 +1,3 @@
pub mod core;
pub use core::{AtomCollection, Bond, BondOrder};
pub use core::{is_amino_acid, AtomCollection, Bond, BondOrder};
pub use pdbtbx::Element;
15 changes: 15 additions & 0 deletions ferritin-featurizers/Cargo.toml
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@@ -0,0 +1,15 @@
[package]
name = "ferritin-featurizers"
version.workspace = true
edition.workspace = true
authors.workspace = true
license.workspace = true
description.workspace = true

[dependencies]
ferritin-core = { path = "../ferritin-core" }
serde = { workspace = true }
pdbtbx.workspace = true
itertools.workspace = true
candle-core = "0.7.2"
strum = { version = "0.26", features = ["derive"] }
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