doc compiling fix 9

docs/Doxyfile

@@ -74,7 +74,7 @@ PROJECT_ICON           =
 # entered, it will be relative to the location where doxygen was started. If
 # left blank the current directory will be used.
 
-OUTPUT_DIRECTORY       = ../build/docs/doxygen
+OUTPUT_DIRECTORY       = @DOXYGEN_OUTPUT_DIR@
 
 # If the CREATE_SUBDIRS tag is set to YES then doxygen will create up to 4096
 # sub-directories (in 2 levels) under the output directory of each output format
@@ -949,7 +949,7 @@ WARN_LOGFILE           =
 # spaces. See also FILE_PATTERNS and EXTENSION_MAPPING
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  = ../IR_lib/cpp
+INPUT                  = @DOXYGEN_INPUT_DIR@
 
 # This tag can be used to specify the character encoding of the source files
 # that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses

docs/source/conf.py

@@ -4,8 +4,8 @@ def configureDoxyfile(input_dir, output_dir):
     with open('../Doxyfile', 'r') as file :
         filedata = file.read()
 
-    #filedata = filedata.replace('@DOXYGEN_INPUT_DIR@', input_dir)
-    #filedata = filedata.replace('@DOXYGEN_OUTPUT_DIR@', output_dir)
+    filedata = filedata.replace('@DOXYGEN_INPUT_DIR@', input_dir)
+    filedata = filedata.replace('@DOXYGEN_OUTPUT_DIR@', output_dir)
 
     with open('Doxyfile', 'w') as file:
         file.write(filedata)
@@ -16,8 +16,8 @@ def configureDoxyfile(input_dir, output_dir):
 breathe_projects = {}
 
 if read_the_docs_build:
-    input_dir = '../../IR_lib'
-    output_dir = '../build'
+    input_dir = '../../IR_lib/cpp'
+    output_dir = '../../build/docs/doxygen'
     configureDoxyfile(input_dir, output_dir)
     subprocess.call('doxygen', shell=True)
     breathe_projects['information_reconciliation'] = output_dir + '/xml'