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Minor updates to sync with latest zarr version #113

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@anwai98 anwai98 commented Jan 11, 2025

This PR accomodates the visible issues to adapt to the latest zarr v3 version (https://zarr.readthedocs.io/en/stable/user-guide/v3_migration.html#v3-migration-guide). I'll wait to see if the tests work!

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anwai98 commented Jan 11, 2025

Okay, there are a few more changes than I anticipated. The functional structure of creating hierarchies has changed a bit! I'll leave this open for now and come back once I have time. For now, we should stick to zarr <3 and pin these in all relevant packages (eg. micro-sam, etc)

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See also #114

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