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Release 0.5.1
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nokara26 committed Dec 5, 2024
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9 changes: 8 additions & 1 deletion CHANGELOG.md
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# Changelog

## [0.5.1] - TBD

### Fixed

- Fix protein-insertion regex. [#13](https://github.com/chrovis/clj-hgvs/pull/13)

## [0.5.0] - 2024-10-16

### BREAKING
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## 0.1.0 - 2017-04-17

[Unreleased]: https://github.com/chrovis/clj-hgvs/compare/0.5.0...HEAD
[Unreleased]: https://github.com/chrovis/clj-hgvs/compare/0.5.1...HEAD
[0.5.1]: https://github.com/chrovis/clj-hgvs/compare/0.5.0...0.5.1
[0.5.0]: https://github.com/chrovis/clj-hgvs/compare/0.4.7...0.5.0
[0.4.7]: https://github.com/chrovis/clj-hgvs/compare/0.4.6...0.4.7
[0.4.6]: https://github.com/chrovis/clj-hgvs/compare/0.4.5...0.4.6
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4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -19,13 +19,13 @@ clj-hgvs provides:
Clojure CLI/deps.edn:

```clojure
clj-hgvs {:mvn/version "0.5.0"}
clj-hgvs {:mvn/version "0.5.1"}
```

Leiningen/Boot:

```clojure
[clj-hgvs "0.5.0"]
[clj-hgvs "0.5.1"]
```

To use clj-hgvs with Clojure 1.8, you must include a dependency on
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6 changes: 3 additions & 3 deletions docs/clj-hgvs.repairer.html
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<!DOCTYPE html PUBLIC ""
"">
<html><head><meta charset="UTF-8" /><title>clj-hgvs.repairer documentation</title><link rel="stylesheet" type="text/css" href="css/default.css" /><link rel="stylesheet" type="text/css" href="highlight/solarized-light.css" /><script type="text/javascript" src="highlight/highlight.min.js"></script><script type="text/javascript" src="js/jquery.min.js"></script><script type="text/javascript" src="js/page_effects.js"></script><script>hljs.initHighlightingOnLoad();</script></head><body><div id="header"><h2>Generated by <a href="https://github.com/weavejester/codox">Codox</a> with <a href="https://github.com/xsc/codox-theme-rdash">RDash UI</a> theme</h2><h1><a href="index.html"><span class="project-title"><span class="project-name">clj-hgvs</span> <span class="project-version">0.5.0</span></span></a></h1></div><div class="sidebar primary"><h3 class="no-link"><span class="inner">Project</span></h3><ul class="index-link"><li class="depth-1 "><a href="index.html"><div class="inner">Index</div></a></li></ul><h3 class="no-link"><span class="inner">Namespaces</span></h3><ul><li class="depth-1"><div class="no-link"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>clj-hgvs</span></div></div></li><li class="depth-2 branch"><a href="clj-hgvs.coordinate.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>coordinate</span></div></a></li><li class="depth-2 branch"><a href="clj-hgvs.core.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>core</span></div></a></li><li class="depth-2 branch"><a href="clj-hgvs.mutation.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>mutation</span></div></a></li><li class="depth-2 current"><a href="clj-hgvs.repairer.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>repairer</span></div></a></li></ul></div><div class="sidebar secondary"><h3><a href="#top"><span class="inner">Public Vars</span></a></h3><ul><li class="depth-1"><a href="clj-hgvs.repairer.html#var-built-in-repairers"><div class="inner"><span>built-in-repairers</span></div></a></li><li class="depth-1"><a href="clj-hgvs.repairer.html#var-infer-kind"><div class="inner"><span>infer-kind</span></div></a></li></ul></div><div class="namespace-docs" id="content"><h1 class="anchor" id="top">clj-hgvs.repairer</h1><div class="doc"><pre class="plaintext">HGVS repair functions.
<html><head><meta charset="UTF-8" /><title>clj-hgvs.repairer documentation</title><link rel="stylesheet" type="text/css" href="css/default.css" /><link rel="stylesheet" type="text/css" href="highlight/solarized-light.css" /><script type="text/javascript" src="highlight/highlight.min.js"></script><script type="text/javascript" src="js/jquery.min.js"></script><script type="text/javascript" src="js/page_effects.js"></script><script>hljs.initHighlightingOnLoad();</script></head><body><div id="header"><h2>Generated by <a href="https://github.com/weavejester/codox">Codox</a> with <a href="https://github.com/xsc/codox-theme-rdash">RDash UI</a> theme</h2><h1><a href="index.html"><span class="project-title"><span class="project-name">clj-hgvs</span> <span class="project-version">0.5.1</span></span></a></h1></div><div class="sidebar primary"><h3 class="no-link"><span class="inner">Project</span></h3><ul class="index-link"><li class="depth-1 "><a href="index.html"><div class="inner">Index</div></a></li></ul><h3 class="no-link"><span class="inner">Namespaces</span></h3><ul><li class="depth-1"><div class="no-link"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>clj-hgvs</span></div></div></li><li class="depth-2 branch"><a href="clj-hgvs.coordinate.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>coordinate</span></div></a></li><li class="depth-2 branch"><a href="clj-hgvs.core.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>core</span></div></a></li><li class="depth-2 branch"><a href="clj-hgvs.mutation.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>mutation</span></div></a></li><li class="depth-2 current"><a href="clj-hgvs.repairer.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>repairer</span></div></a></li></ul></div><div class="sidebar secondary"><h3><a href="#top"><span class="inner">Public Vars</span></a></h3><ul><li class="depth-1"><a href="clj-hgvs.repairer.html#var-built-in-repairers"><div class="inner"><span>built-in-repairers</span></div></a></li><li class="depth-1"><a href="clj-hgvs.repairer.html#var-infer-kind"><div class="inner"><span>infer-kind</span></div></a></li></ul></div><div class="namespace-docs" id="content"><h1 class="anchor" id="top">clj-hgvs.repairer</h1><div class="doc"><pre class="plaintext">HGVS repair functions.
</pre></div><div class="public anchor" id="var-built-in-repairers"><h3>built-in-repairers</h3><div class="usage"></div><div class="doc"><pre class="plaintext">The built-in repair functions.

A repair fn must take a HGVS string and an inferred kind, and return a
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s))

The built-in rules are based on frequent mistakes in popular public-domain
databases such as dbSNP and ClinVar.</pre></div><div class="src-link"><a href="https://github.com/chrovis/clj-hgvs/blob/0.5.0/src/clj_hgvs/repairer.cljc#L302">view source</a></div></div><div class="public anchor" id="var-infer-kind"><h3>infer-kind</h3><div class="usage"><code>(infer-kind s)</code></div><div class="doc"><pre class="plaintext">Infers a kind from the provided string, returning the kind keyword.
</pre></div><div class="src-link"><a href="https://github.com/chrovis/clj-hgvs/blob/0.5.0/src/clj_hgvs/repairer.cljc#L6">view source</a></div></div></div></body></html>
databases such as dbSNP and ClinVar.</pre></div><div class="src-link"><a href="https://github.com/chrovis/clj-hgvs/blob/0.5.1/src/clj_hgvs/repairer.cljc#L302">view source</a></div></div><div class="public anchor" id="var-infer-kind"><h3>infer-kind</h3><div class="usage"><code>(infer-kind s)</code></div><div class="doc"><pre class="plaintext">Infers a kind from the provided string, returning the kind keyword.
</pre></div><div class="src-link"><a href="https://github.com/chrovis/clj-hgvs/blob/0.5.1/src/clj_hgvs/repairer.cljc#L6">view source</a></div></div></div></body></html>
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2 changes: 1 addition & 1 deletion project.clj
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(defproject clj-hgvs "0.5.1-SNAPSHOT"
(defproject clj-hgvs "0.5.1"
:description "Clojure(Script) library for handling HGVS"
:url "https://github.com/chrovis/clj-hgvs"
:license {:name "Apache License, Version 2.0"
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