Fixed and added testing

tests/test_case/test_published_project.py

@@ -1,3 +1,5 @@
+import pytest
+
 from biosimulators_test_suite import data_model
 from biosimulators_test_suite.exceptions import InvalidOutputsException, SkippedTestCaseException
 from biosimulators_test_suite.results.data_model import TestCaseResult, TestCaseResultType
@@ -58,6 +60,19 @@ def test_find_cases(self):
         self.assertEqual(len(all_cases), 0)
         self.assertEqual(len(compatible_cases), 0)
 
+        ### TEMPORARY RBA REMOVAL, REMOVE THIS NEXT SECTION IF RESTORED
+        with pytest.raises(RuntimeError):
+            all_cases, _ = find_cases({
+                'algorithms': [
+                    {
+                        'id': "rba",
+                        'kisaoId': {'id': 'KISAO_0000669'},
+                        'modelFormats': [{'id': 'format_2585', 'supportedFeatures': []}],
+                    }
+                ]
+            })
+
+
     def test_SimulatorCanExecutePublishedProject_description(self):
         case = SimulatorCanExecutePublishedProject(task_requirements=[
             data_model.SedTaskRequirements(model_format='format_2585', simulation_algorithm='KISAO_0000027'),

tests/test_examples.py

@@ -1,3 +1,4 @@
+import pytest
 from biosimulators_utils.combine.io import CombineArchiveReader
 from biosimulators_utils.combine.data_model import CombineArchiveContentFormat
 from biosimulators_utils.combine.utils import get_sedml_contents
@@ -37,10 +38,10 @@ def tearDown(self):
         shutil.rmtree(self.dirname)
 
     @parameterized.parameterized.expand(EXAMPLES)
-    def test_example(self, name, example_filename):
-        ### TEMPORARY RBA REMOVAL
-        if "rba" in example_filename:
-            return
+    def test_example_should_pass(self, name, example_filename):
+        self.run_test_example(name, example_filename)
+
+    def run_test_example(self, name, example_filename):
         example_specs_filename = os.path.join(example_filename[0:-5], 'expected-results.json')
 
         example_base_dir = os.path.join(os.path.dirname(example_filename))