CMI-PB Teaching and Outreach Material

This repository contains teaching and outreach material for the CMI-PB project. A rendered version of this material is available here: https://bioboot.github.io/cmi-pb_teaching/

All materials herein are crafted using Quarto, an open-source scientific and technical publishing system built on Pandoc.

Technology Stack

• Quarto: For creating and rendering the teaching materials.

Getting Started

Prerequisites

Ensure you have the following installed on your machine:

• Quarto
• Pandoc

Installation and Rendering

1. Clone the repository to your local machine:

git clone https://github.com/bioboot/cmi-pb_teaching.git
cd cmi-pb_teaching

2. To render the material, run:

quarto render <file-name>.qmd

Replace <file-name> with the name of the file you want to render.

Contact

Much of this material was developed for graduate level instruction at UC San Diego. We would be happy to help you adapt and utilize this material for your own purposes.

Please contact Barry and/or Bjoern. We would be delighted to hear from you.

License

This work is licensed under a Creative Commons License: CC BY-NC

Contributing

We welcome contributions from the community! Whether you're looking to fix bugs, add new materials, or adapt and improve for your own purposes, here's how to get started:

1. Fork the repository.
2. Create a new branch for your changes: git checkout -b my-new-feature.
3. Make your changes and commit them: git commit -am 'Add some changes'.
4. Push to your branch: git push origin my-new-feature.
5. Submit a Pull Request through GitHub and we'll review your changes.

Alternatively, send us an email and we will help you get to where you want to be.