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Draft: Summer placement 2024 #14

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Pull request for the development carried out as part of the 2024 UKAEA Summer Placement Project. The scope of the project was to develop an initial version of the tool demonstrated with thermal and mechanical examples.

@arjavp-ukaea
add thermal_working_demo
d57326d
@arjavp-ukaea
resolve merge conflicts with .gitignore
1f9ae53
@arjavp-ukaea
modify .npz and utils to generate/store data from 1 ground truth sim
da73a50
@arjavp-ukaea
add .exodus files that are used to build dataset
5e694a7
@arjavp-ukaea
add ground truth exodus file to be perturbed by mooseherder
e597d28
@arjavp-ukaea
update dataset class to only store temperature fields and y_data
bd90218
@arjavp-ukaea
update to only include pycache and .vscode
4a0feec
@arjavp-ukaea
add mlp regression model
7234a10
@arjavp-ukaea
modify to use specific_heat + surf_heat_flux as material props to per…
0c8731e 
…turb
@arjavp-ukaea
add requirements.txt
a2e8b2c
@arjavp-ukaea
update to include venv and pyvale/
a32ae7f
@arjavp-ukaea
remove extraneous input files and sim directories
c71b2db
@arjavp-ukaea
include .ipynb checkpoints & exodus_files
ff0c00b
@arjavp-ukaea
add classes and change param to thermal_cond
a0bbd15
@arjavp-ukaea
add class imbalance and data uniqueness checks
2643c03
@arjavp-ukaea
add all exodus files
6394122
@arjavp-ukaea
save model state_dict of best training run
cc02b9e
@arjavp-ukaea
fix bug causing mismatch between x and y data
7e075ce
@arjavp-ukaea
update dataset to include 10,000 examples
2a5ad51
@arjavp-ukaea
add .toml and init files for package setup
73657db
@arjavp-ukaea
update to use sklearn's sobol with stratified sampling for equal clas…
ca41f2c 
…s sizes
@arjavp-ukaea
update to work with modified dataset_generator
01de542
@arjavp-ukaea
update calculate_y_values to include tolerance factor for generating …
477cad1 
…classes
@arjavp-ukaea
update requirements.txt
6824197
@arjavp-ukaea
update .gitignore
d800de0
@arjavp-ukaea
remove exodus files from repo
cc831c3
@arjavp-ukaea
remove exodus files from repo
33c4792
@arjavp-ukaea
add src, docs and data dirs and move existing files to relevant dirs
49e6828
@arjavp-ukaea
move usage code to examples/
d70ea37
@arjavp-ukaea
create data loading example
0e41c89
arjavp-ukaea and others added 28 commits July 30, 2024 15:40
@arjavp-ukaea
update .gitignore to track examples dir
1ee1e12
@arjavp-ukaea
update icarus version
b9fc3a1
@arjavp-ukaea
add loading of monoblock dataset
1a82f28
@arjavp-ukaea
make utils.py class based
e94eadc
@arjavp-ukaea
allow user to define ground_truth params
e72b0f9
@arjavp-ukaea
add/update moose config setup script
c5cf695
@barisc-ukaea
mechanical commit
1a653fd
@barisc-ukaea
Add files via upload
f381113
@barisc-ukaea
Delete src/icarus/mechanical/mechanical_cnn_model (2).py
177e8b9
@barisc-ukaea
Delete src/icarus/mechanical directory
510e902
@barisc-ukaea
Create test
be2f21b
@barisc-ukaea
Create test
175afd8
@barisc-ukaea
Add files via upload
c3e1cfe
@barisc-ukaea
Merge pull request #12 from aurora-multiphysics/icarus-mechanical
8bded08 
Icarus mechanical
@lukethehuman
Revert "Icarus mechanical"
3c61cb5
@lukethehuman
Merge pull request #13 from aurora-multiphysics/revert-12-icarus-mech…
f1da691 
…anical

Revert "Icarus mechanical"
@barisc-ukaea
Delete mechanical directory
da4d104
@arjavp-ukaea
update readme to include moose config file setup instructions
1733194
@arjavp-ukaea
remove verbose README description and update package name to icarus-f…
d66b1cf 
…usion
@arjavp-ukaea
move examples directory to src/icarus
6750365
@arjavp-ukaea
add classes to init.py
83c1b88
@arjavp-ukaea
combine utils.py and sample_generator functionality
7d2de76
@arjavp-ukaea
remove extraneous normalisation functions
500902b
@arjavp-ukaea
add nn dataclass for parameter passing
e1c87d7
@arjavp-ukaea
add numpy docstring standard for funcs and classes
ceed45e
@arjavp-ukaea
remove system specific paths to moose and proteus
9cfdd00
@arjavp-ukaea
Merge pull request #11 from aurora-multiphysics/package-testing
333b208 
Draft: Arjav placement work
@lukethehuman
Merge branch 'dev' into summer-placement
88cd106
@lukethehuman lukethehuman changed the title Summer placement 2024 Draft: Summer placement 2024 Oct 14, 2024
@lukethehuman lukethehuman marked this pull request as draft October 14, 2024 15:37
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3 participants
@lukethehuman @arjavp-ukaea @barisc-ukaea