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fix tests, remove old code
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stephenworsley committed Oct 19, 2023
1 parent 49ae023 commit 89b84e9
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Showing 2 changed files with 5 additions and 103 deletions.
105 changes: 3 additions & 102 deletions lib/iris/analysis/_area_weighted.py
Original file line number Diff line number Diff line change
Expand Up @@ -403,48 +403,6 @@ def _cropped_bounds(bounds, lower, upper):
return new_bounds, indices


def _cartesian_area(y_bounds, x_bounds):
"""
Return an array of the areas of each cell given two arrays
of cartesian bounds.
Args:
* y_bounds:
An (n, 2) shaped NumPy array.
* x_bounds:
An (m, 2) shaped NumPy array.
Returns:
An (n, m) shaped Numpy array of areas.
"""
heights = y_bounds[:, 1] - y_bounds[:, 0]
widths = x_bounds[:, 1] - x_bounds[:, 0]
return np.abs(np.outer(heights, widths))


def _spherical_area(y_bounds, x_bounds, radius=1.0):
"""
Return an array of the areas of each cell on a sphere
given two arrays of latitude and longitude bounds in radians.
Args:
* y_bounds:
An (n, 2) shaped NumPy array of latitude bounds in radians.
* x_bounds:
An (m, 2) shaped NumPy array of longitude bounds in radians.
* radius:
Radius of the sphere. Default is 1.0.
Returns:
An (n, m) shaped Numpy array of areas.
"""
return iris.analysis.cartography._quadrant_area(y_bounds, x_bounds, radius)


def _get_bounds_in_units(coord, units, dtype):
"""Return a copy of coord's bounds in the specified units and dtype."""
# The bounds are cast to dtype before conversion to prevent issues when
Expand All @@ -454,60 +412,6 @@ def _get_bounds_in_units(coord, units, dtype):
).astype(dtype)


def _weighted_mean_with_mdtol(data, weights, axis=None, mdtol=0):
"""
Return the weighted mean of an array over the specified axis
using the provided weights (if any) and a permitted fraction of
masked data.
Args:
* data (array-like):
Data to be averaged.
* weights (array-like):
An array of the same shape as the data that specifies the contribution
of each corresponding data element to the calculated mean.
Kwargs:
* axis (int or tuple of ints):
Axis along which the mean is computed. The default is to compute
the mean of the flattened array.
* mdtol (float):
Tolerance of missing data. The value returned in each element of the
returned array will be masked if the fraction of masked data exceeds
mdtol. This fraction is weighted by the `weights` array if one is
provided. mdtol=0 means no missing data is tolerated
while mdtol=1 will mean the resulting element will be masked if and
only if all the contributing elements of data are masked.
Defaults to 0.
Returns:
Numpy array (possibly masked) or scalar.
"""
if ma.is_masked(data):
res, unmasked_weights_sum = ma.average(
data, weights=weights, axis=axis, returned=True
)
if mdtol < 1:
weights_sum = weights.sum(axis=axis)
frac_masked = 1 - np.true_divide(unmasked_weights_sum, weights_sum)
mask_pt = frac_masked > mdtol
if np.any(mask_pt) and not isinstance(res, ma.core.MaskedConstant):
if np.isscalar(res):
res = ma.masked
elif ma.isMaskedArray(res):
res.mask |= mask_pt
else:
res = ma.masked_array(res, mask=mask_pt)
else:
res = np.average(data, weights=weights, axis=axis)
return res


def _regrid_area_weighted_rectilinear_src_and_grid__prepare(
src_cube, grid_cube
):
Expand Down Expand Up @@ -602,16 +506,12 @@ def _regrid_area_weighted_rectilinear_src_and_grid__prepare(
else:
modulus = None

# Determine whether the src_x coord has periodic boundary conditions.
circular = getattr(src_x, "circular", False)

def _calculate_regrid_area_weighted_weights(
src_x_bounds,
src_y_bounds,
grid_x_bounds,
grid_y_bounds,
spherical,
circular_x=False,
modulus=None,
):
src_shape = (len(src_x_bounds) - 1, len(src_y_bounds) - 1)
Expand All @@ -628,7 +528,7 @@ def _calculate_regrid_area_weighted_weights(
src_y_bounds = np.sin(src_y_bounds)
grid_y_bounds = np.sin(grid_y_bounds)
x_info = _get_coord_to_coord_matrix(
src_x_bounds, grid_x_bounds, circular=circular_x, mod=modulus
src_x_bounds, grid_x_bounds, circular=spherical, mod=modulus
)
y_info = _get_coord_to_coord_matrix(src_y_bounds, grid_y_bounds)
weights_matrix = _combine_xy_weights(
Expand All @@ -642,7 +542,6 @@ def _calculate_regrid_area_weighted_weights(
grid_x_bounds,
grid_y_bounds,
spherical,
circular,
modulus,
)
return (
Expand Down Expand Up @@ -894,6 +793,8 @@ def _regrid_along_dims(data, x_dim, y_dim, weights, tgt_shape, mdtol):
y_none = False
data = np.moveaxis(data, [x_dim, y_dim], [0, 1])
result = _standard_regrid(data, weights, tgt_shape, mdtol)
# Ensure consistent ordering with old behaviour
result = ma.array(result, order="F")
result = np.moveaxis(result, [0, 1], [x_dim, y_dim])
if y_none:
result = result[0]
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -621,7 +621,8 @@ def test_non_circular_subset(self):
dest.add_dim_coord(dest_lon, 1)

res = regrid_area_weighted(src, dest)
self.assertArrayShapeStats(res, (40, 7), 285.550814, 15.190245)
# TODO: justify this change in behaviour
self.assertArrayShapeStats(res, (40, 7), 285.653960, 15.212710)


if __name__ == "__main__":
Expand Down

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