airflow-pipelines

We use Apache Airflow to demonstrate container orchestration for a bioinformatics pipeline using the KubernetesPodOperator model.

NOTE: This code is unfinished

Process

Data is pulled from the rarecompute/airflow-data repository and placed into the workspace persistent volume
Data is processed using established variables in Apache Airflow
Artifacts are generated and stored in the workspace persistent volume and can be downloaded via SFTP

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