Merge branch 'Open-MSS:develop' into i1860

.github/workflows/testing-all-oses.yml

@@ -29,13 +29,13 @@ jobs:
           sed -e "s/.*://" > requirements.tmp.txt
         cat requirements.d/development.txt >> requirements.tmp.txt
         echo "pytest-randomly" >> requirements.tmp.txt
-        sed -e '/^$/d' -e '/^#.*$/d' requirements.tmp.txt > requirements.txt
+        sed -e '/^$/d' -e '/^#.*$/d' -e 's/\s*# \[not win\]$//' requirements.tmp.txt > requirements.txt
         rm requirements.tmp.txt
         cat requirements.txt
     - name: Get current year and calendar week
       id: year-and-week
       run: echo "year-and-week=$(date +%Y-%V)" >> "$GITHUB_OUTPUT"
-    - uses: mamba-org/setup-micromamba@v1
+    - uses: mamba-org/setup-micromamba@v2
       with:
         environment-file: requirements.txt
         environment-name: ci
@@ -44,8 +44,4 @@ jobs:
         cache-environment-key: environment-${{ steps.year-and-week.outputs.year-and-week }}
     - name: Run tests
       timeout-minutes: 40
-      # The ignored files can somehow cause the test suite to timeout.
-      # I have no idea yet on why this happens and how to fix it.
-      # Even a module level skip is not enough, they need to be completely ignored.
-      # TODO: fix those tests and drop the ignores
       run: micromamba run -n ci env QT_QPA_PLATFORM=offscreen pytest -v -n logical --durations=20 --cov=mslib tests

CONTRIBUTING.md

@@ -1,17 +1,8 @@
 # Contributing
 
-When contributing to this repository, please first discuss the change you wish to make via issue,
-email, or any other method with the owners of this repository before making a change.
+We'd love for your contribution to the Mission Support System (MSS) to help make it better!
+We want contributing to MSS to be fun and educational for everyone.
+All kind of contributions are welcome, including issue descriptions and new documents,
+as well as updates and improvements and more.
 
-Please note we have a code of conduct, please follow it in all your interactions with the project.
-
-## Pull Request Process
-
-1. Ensure any install or build dependencies are removed before the end of the layer when doing a
-   build.
-2. Update the README.md with details of changes to the interface, this includes new environment
-   variables, exposed ports, useful file locations and container parameters.
-3. Increase the version numbers in any examples files and the README.md to the new version that this
-   Pull Request would represent. The versioning scheme we use is [SemVer](http://semver.org/).
-4. You may merge the Pull Request in once you have the sign-off of two other developers, or if you
-   do not have permission to do that, you may request the second reviewer to merge it for you.
+Our **[contributing](https://open-mss.github.io/contributing/)** guidelines provide instructions on how to get involved.

README.md

@@ -114,3 +114,11 @@ in the same directory as this README file.
    When using this software, please be so kind and acknowledge its use by
    citing the above mentioned reference documentation in publications,
    presentations, reports, etc. that you create. Thank you very much.
+
+Acknowledgements
+----------------
+
+We are very grateful for your continuing support for MSS!
+
+See our [Contributors page](https://mss.readthedocs.io/en/stable/authors.html) for a list of authors. See also our info on [funding](
+https://mss.readthedocs.io/en/stable/funding.html).

docs/development.rst

@@ -533,8 +533,27 @@ Publish on Conda Forge
 Google Summer of Code(TM)
 -------------------------
 
-MSS takes part in Google Summer of Code
-as a sub-organization of Python Software Foundation(PSF).
+MSS takes part in `Google Summer of Code <https://summerofcode.withgoogle.com/>`_
+as a `sub-organization of Python Software Foundation (PSF) <https://python-gsoc.org/>`_.
+
+
+GSoC'24 Projects
+................
+
+- `Aryan Gupta: (MSS) msui: Improve MSUI : GSoC 2024 <https://github.com/Open-MSS/MSS/wiki/Aryan-Gupta:-(MSS)-msui:-Improve-MSUI-:-GSOC2024>`_
+- `Preetam Sundar Das: MISSION SUPPORT SYSTEM(MSS): GUI FOR AUTOMATED PLOTTING : GSOC 2024 <https://github.com/Open-MSS/MSS/wiki/Preetam-Sundar-Das:-MISSION-SUPPORT-SYSTEM(MSS):-GUI-FOR-AUTOMATED-PLOTTING-:-GSOC2024>`_
+- `Rohit Prasad: Mission Support System: Improve multiple flightpath docking widget : GSOC 2024 <https://github.com/Open-MSS/MSS/wiki/Rohit-Prasad:-Mission-Support-System:-Improve-multiple-flightpath-docking-widget-:-GSOC2024>`_
+
+
+GSoC'23 Projects
+................
+
+- `Shubh Gaur: Mission Support System(MSS) : UI-improvements : GSOC 2023 <https://github.com/Open-MSS/MSS/wiki/UI%E2%80%90improvements-GSOC-2023>`_
+
+- `Nilupul Manodya: Mission Support System : Implement a SAML 2.0 service provider (SP) into mscolab : GSOC 2023 <https://github.com/Open-MSS/MSS/wiki/Implement-a-SAML-2.0-service-provider-(SP)-into-mscolab-:-GSOC-2023>`_
+
+
+
 
 GSoC'22 Projects
 ................

docs/funding.rst

@@ -0,0 +1,112 @@
+Funding and Support
+===================
+
+The Mission Support System (MSS) kindly acknowledges funding and support from the following sources:
+
+Conda-Forge
+-----------
+
+.. figure:: https://conda-forge.org/img/logo.png
+   :alt: Logo conda-forge
+   :target: https://conda-forge.org/
+   :width: 300
+
+.. raw:: html
+
+   <div style="height:20px;"></div>
+
+We kindly acknowledge support by the open-source `conda-forge community <https://conda-forge.org/docs/>`_
+
+
+Google Summer of Code
+---------------------
+
+.. figure:: https://libertem.github.io/images/GSoC-icon-192.png
+   :alt: Logo Google Summer of Code
+   :target: https://summerofcode.withgoogle.com/
+   :width: 300
+
+.. raw:: html
+
+   <div style="height:20px;"></div>
+
+We kindly acknowledge funding from `Google Summer of Code 2019, 2020, 2021, 2022, 2023 and 2024 <https://summerofcode.withgoogle.com/>`_ under the `umbrella of the Python Software Foundation <https://python-gsoc.org/>`_.
+
+
+
+DFG, German Research Foundation – UN 311/3-1
+--------------------------------------------
+
+.. figure:: https://www.dfg.de/resource/image/196784/16x9/858/483/500dfa2178773cc68721440c14d86911/B385802C0C046A4BD6F0138CDC3478F0/logo-negativ-267.png
+   :alt: Logo DFG, German Research Foundation
+   :target: https://www.dfg.de/en
+   :width: 300
+
+.. raw:: html
+
+   <div style="height:20px;"></div>
+
+Atmospheric research with HALO is supported by the Priority Programme SPP 1294 of the Deutsche Forschungsgemeinschaft (DFG).
+In 2021 we were funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – UN 311/3-1.
+
+
+
+COVERALLS
+---------
+
+.. figure:: https://s3.amazonaws.com/assets.coveralls.io/assets/coveralls_logo-blue_wshad.png
+   :alt: Logo Coveralls
+   :target: https://coveralls.io/
+   :width: 300
+
+.. raw:: html
+
+   <div style="height:20px;"></div>
+
+We kindly acknowledge support by the COVERALLS company for `open source projects <https://coveralls.io/sign-up>`_.
+
+
+
+Dockerhub
+---------
+
+.. figure:: https://www.docker.com/wp-content/uploads/2023/08/logo-guide-logos-1.svg
+   :alt: Logo Dockerhub
+   :target: https://www.docker.com
+   :width: 300
+
+.. raw:: html
+
+   <div style="height:20px;"></div>
+
+We kindly acknowledge support by the docker company for adding our `application <https://hub.docker.com/u/openmss>`_ to the `Docker-Sponsored Open Source Program <https://www.docker.com/community/open-source/application/>`_.
+
+
+GitHub
+------
+
+.. figure:: https://github.githubassets.com/assets/GitHub-Mark-ea2971cee799.png
+   :alt: Logo GitHub
+   :target: https://github.com/
+   :width: 300
+
+.. raw:: html
+
+   <div style="height:20px;"></div>
+
+We kindly acknowledge support by GitHub for `open-source projects <https://github.com/open-source>`_.
+
+
+
+Forschungszentrum Jülich, `Stratosphere (ICE-4) <https://www.fz-juelich.de/en/ice/ice-4>`_
+------------------------------------------------------------------------------------------
+
+.. figure:: https://www.fz-juelich.de/en/ibg/ibg-1/images/research_groups/general/fz-juelich-logo/@@images/7ca073aa-be02-4577-a1f4-49cf2462a13e.jpeg
+   :target: https://www.fz-juelich.de/er-c/EN/Home/home_node.html
+   :width: 300
+
+.. raw:: html
+
+   <div style="height:20px;"></div>
+
+Forschungszentrum Jülich is supporting MSS with funding for personnel, access to its infrastructure and administrative support.

docs/index.rst

@@ -40,6 +40,7 @@ Topics
    authors
    tutorial
    gallery/index
+   funding
 
 
 Indices and tables

docs/samples/automation/retriever.py

@@ -39,6 +39,7 @@
 
 import mslib
 import mslib.utils
+from mslib.utils.get_projection_params import get_projection_params
 from mslib.utils import thermolib
 from mslib.utils.config import config_loader, read_config_file
 from mslib.utils.units import units
@@ -140,8 +141,7 @@ def main():
     fig = plt.figure()
     for flight, section, vertical, filename, init_time, time in \
             config["automated_plotting"]["flights"]:
-        params = mslib.utils.coordinate.get_projection_params(
-            config["predefined_map_sections"][section]["CRS"].lower())
+        params = get_projection_params(config["predefined_map_sections"][section]["CRS"].lower())
         params["basemap"].update(config["predefined_map_sections"][section]["map"])
         wps = load_from_ftml(filename)
         wp_lats, wp_lons, wp_locs = [[x[i] for x in wps] for i in [0, 1, 3]]

mslib/mscolab/models.py

@@ -216,5 +216,7 @@ def __init__(self, op_id, u_id, commit_hash, version_name=None, comment=None):
         self.op_id = int(op_id)
         self.u_id = int(u_id)
         self.commit_hash = str(commit_hash)
-        self.version_name = str(version_name)
-        self.comment = str(comment)
+        if version_name is not None:
+            self.version_name = str(version_name)
+        if comment is not None:
+            self.comment = str(comment)

mslib/msui/editor.py

@@ -37,8 +37,7 @@
 from mslib.msui.icons import icons
 from mslib.utils.config import MSUIDefaultConfig as mss_default
 from mslib.utils.config import config_loader, dict_raise_on_duplicates_empty, merge_dict
-from mslib.utils.coordinate import get_projection_params
-
+from mslib.utils.get_projection_params import get_projection_params
 
 from mslib.support.qt_json_view import delegate
 from mslib.support.qt_json_view.view import JsonView

mslib/msui/flighttrack.py

@@ -46,7 +46,8 @@
 
 from mslib import __version__
 from mslib.utils.units import units
-from mslib.utils.coordinate import find_location, path_points, get_distance
+from mslib.utils.coordinate import path_points, get_distance
+from mslib.utils.find_location import find_location
 from mslib.utils import thermolib
 from mslib.utils.verify_waypoint_data import verify_waypoint_data
 from mslib.utils.config import config_loader, save_settings_qsettings, load_settings_qsettings

mslib/msui/mpl_pathinteractor.py

@@ -51,7 +51,8 @@
 import matplotlib.patches as mpatches
 from PyQt5 import QtCore, QtWidgets
 
-from mslib.utils.coordinate import get_distance, find_location, latlon_points, path_points
+from mslib.utils.coordinate import get_distance, latlon_points, path_points
+from mslib.utils.find_location import find_location
 from mslib.utils.units import units
 from mslib.utils.thermolib import pressure2flightlevel
 from mslib.msui import flighttrack as ft

mslib/msui/topview.py

@@ -32,7 +32,7 @@
 import logging
 
 from mslib.utils.config import config_loader
-from mslib.utils.coordinate import get_projection_params
+from mslib.utils.get_projection_params import get_projection_params
 from PyQt5 import QtGui, QtWidgets, QtCore
 from mslib.msui.qt5 import ui_topview_window as ui
 from mslib.msui.qt5 import ui_topview_mapappearance as ui_ma

mslib/mswms/mpl_hsec.py

@@ -42,7 +42,7 @@
 import PIL.Image
 
 from mslib.mswms import mss_2D_sections
-from mslib.utils.coordinate import get_projection_params
+from mslib.utils.get_projection_params import get_projection_params
 from mslib.utils.units import convert_to
 from mslib.mswms.utils import make_cbar_labels_readable
 from mslib.utils.loggerdef import configure_mpl_logger

mslib/mswms/wms.py

@@ -143,7 +143,7 @@ def verify_pw(username, password):
         return authfunc(username, password)
 
 from mslib.mswms import mss_plot_driver
-from mslib.utils.coordinate import get_projection_params
+from mslib.utils.get_projection_params import get_projection_params
 
 # Logging the Standard Output, which will be added to the Apache Log Files
 logging.basicConfig(level=logging.DEBUG,