Bug fix in parallel-netcdf to avoid linking to libirc.so AND cherry-pick spack develop PR 48251 (conflict Intel Classic with [email protected])

[climbfuji]

Description

1. Bug fix in parallel-netcdf: avoid linking to legacy and incomplete libirc.so due to parallel-netcdf's bad configure script - see Avoid linking to Intel's libirc.so library (aka bad configure script of package parallel-netcdf) spack-stack#1436 for details.
2. Cherry-pick Add conflict for [email protected]: with Intel Classic spack/spack#48251.

Testing

1. Built unified environment manually on Ubuntu CI runner and verified that libirc.so is not linked in libpnetcdf.so or any library that links against pnetcdf.so (PIO, ESMF). Example:

$ ldd /work/noaa/gmtb/dheinzel/spst-libirc/envs/ue-intel-2021.9.0/install/intel/2021.9.0/parallel-netcdf-1.12.3-5fkm2ji/bin/ncmpidump
        linux-vdso.so.1 (0x00007ffdf0ffd000)
        libpnetcdf.so.4 => /work/noaa/gmtb/dheinzel/spst-libirc/envs/ue-intel-2021.9.0/install/intel/2021.9.0/parallel-netcdf-1.12.3-5fkm2ji/lib/libpnetcdf.so.4 (0x00007f9742dea000)
        libifport.so.5 => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libifport.so.5 (0x00007f9742dbb000)
        libmpifort.so.12 => /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/lib/libmpifort.so.12 (0x00007f9742a07000)
        libmpi.so.12 => /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/lib/release/libmpi.so.12 (0x00007f97410bc000)
        libm.so.6 => /usr/lib64/libm.so.6 (0x00007f9740fe1000)
        libgcc_s.so.1 => /usr/lib64/libgcc_s.so.1 (0x00007f9740fc4000)
        libc.so.6 => /usr/lib64/libc.so.6 (0x00007f9740dbb000)
        libmpicxx.so.12 => /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/lib/libmpicxx.so.12 (0x00007f9740b9b000)
        libimf.so => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libimf.so (0x00007f97407a4000)
        libirng.so => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libirng.so (0x00007f9740489000)
        libcilkrts.so.5 => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libcilkrts.so.5 (0x00007f9740248000)
        libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x00007f9740021000)
        libintlc.so.5 => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libintlc.so.5 (0x00007f973ffa5000)
        libsvml.so => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libsvml.so (0x00007f973e8d1000)
        /lib64/ld-linux-x86-64.so.2 (0x00007f9743724000)
        librt.so.1 => /usr/lib64/librt.so.1 (0x00007f973e8ca000)
        libdl.so.2 => /usr/lib64/libdl.so.2 (0x00007f973e8c5000)
        libpthread.so.0 => /usr/lib64/libpthread.so.0 (0x00007f973e8c0000)
orion-login-4[49] dheinzel$ ldd /work/noaa/gmtb/dheinzel/spst-libirc/envs/ue-intel-2021.9.0/install/intel/2021.9.0/parallel-netcdf-1.12.3-5fkm2ji/lib/libpnetcdf.so
        linux-vdso.so.1 (0x00007fff8d9f3000)
        libifport.so.5 => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libifport.so.5 (0x00007fad2b37a000)
        libmpicxx.so.12 => /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/lib/libmpicxx.so.12 (0x00007fad2b15a000)
        libmpifort.so.12 => /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/lib/libmpifort.so.12 (0x00007fad2ada6000)
        libmpi.so.12 => /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/lib/release/libmpi.so.12 (0x00007fad2945b000)
        libimf.so => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libimf.so (0x00007fad29064000)
        libirng.so => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libirng.so (0x00007fad28d49000)
        libm.so.6 => /usr/lib64/libm.so.6 (0x00007fad28c6e000)
        libcilkrts.so.5 => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libcilkrts.so.5 (0x00007fad28a2d000)
        libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x00007fad28806000)
        libintlc.so.5 => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libintlc.so.5 (0x00007fad2878a000)
        libsvml.so => /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/compiler/lib/intel64_lin/libsvml.so (0x00007fad270b4000)
        libgcc_s.so.1 => /usr/lib64/libgcc_s.so.1 (0x00007fad27099000)
        libc.so.6 => /usr/lib64/libc.so.6 (0x00007fad26e90000)
        /lib64/ld-linux-x86-64.so.2 (0x00007fad2bce3000)
        librt.so.1 => /usr/lib64/librt.so.1 (0x00007fad26e8b000)
        libdl.so.2 => /usr/lib64/libdl.so.2 (0x00007fad26e86000)
        libpthread.so.0 => /usr/lib64/libpthread.so.0 (0x00007fad26e7f000)

2. Ran ncmpidump (from parallel-netcdf) on netCDF files on Orion (srun -n 2 ncmpidump ...).
3. See Avoid linking to libirc.so in spack (parallel-netcdf), turn off crypt variant for Python, and update Orion site config to fix tar issue spack-stack#1435