Fix spelling

IDR · Sep 23, 2024 · 1112ab8 · 1112ab8
1 parent 8b70f9a
commit 1112ab8
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/experimentA/idr0158-experimentA-annotation.csv b/experimentA/idr0158-experimentA-annotation.csv
@@ -2,9 +2,9 @@ Dataset Name,Image Name,Characteristics [Organism],Term Source 1 REF,Term Source
 IBEX,IBEX_nLN1.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.1038/s41596-021-00644-9,nLN1,Non-FL,49,Male,,Goat anti-rabbit IgG,AB_2535709,1:400,,,,,,,,,,SPARC,AB_2892754,1:50,BCL2,AB_2563279,1:25,CD10,AB_3083665,1:50,CD10,AB_314915,1:50,Collagen IV,AB_305584,1:200,CD20,AB_10734358,1:200,CD21,AB_2892739,1:600,BCL6,AB_10898007,1:25,CD31,AB_2566326,1:25,IgD,AB_11150595,1:25,CD138,AB_2561878,1:200,CD23,AB_2892740,1:25,CD163,AB_2563475,1:100,CD11c,AB_10612006,1:25,HLA-DR,AB_493175,1:100,CD1c,AB_1088999,1:50,CD4,AB_2802361,1:25,CD25,AB_2563588,1:25,FOXP3,AB_2573609,1:25,Ki-67,AB_10611571,1:25,CD8,AB_10549301,1:25,CD3,AB_2563236,1:100,CXCL13,AB_2892755,1:25,CD69,AB_528871,1:25,PD-1,AB_940483,1:100,ICOS,AB_2122584,1:25,LYVE-1,AB_2892756,1:100,CD68,AB_3073741,1:100,CD39,AB_940425,1:50,CD35,AB_2292231,1:800,Lumican,AB_2892757,1:50,DC-SIGN,AB_1186092,1:50,IRF4,AB_2563005,1:10,a-SMA,AB_2574461,1:100,CD49a,AB_1236407,1:50,Desmin,AB_2892748,1:200,Vimentin,AB_2892753,1:200,CD44,AB_493681,1:50,CD45,AB_2892742,1:50,CD94,AB_314536,1:50,OMAP-1,https://lod.humanatlas.io/omap/1-human-lymph-node-ibex/v1.4/,/nLN1/,Raw image,"Unusual ROI due to tissue biopsy, high background in CD25, CD69, IgD, CD94, and ICOS channels thresholded on CD45 surfaces, high background in SPARC channel on outer edge, best rendering for CD1c (max: 30), CD10 signal high on neutrophils but dim on GC B cells",4.8,"AF532:Cycle1_SPARC, AF647:Cycle1_BCL2, PE:Cycle1_CD10, AF700:Cycle1_CollagenIV, Hoechst:Cycle1_Nuclei, AF488:Cycle1_CD20, AF532:Cycle2_CD21, AF647:Cycle2_BCL6, AF700:Cycle2_CD31, Hoechst:Cycle2_Nuclei, AF488:Cycle2_IgD, PE:Cycle2_CD138, AF532:Cycle3_CD23, AF647:Cycle3_CD163, AF700:Cycle3_CD11c, Hoechst:Cycle3_Nuclei, AF488:Cycle3_HLADR, PE:Cycle3_CD1c, AF532:Cycle4_CD4, AF647:Cycle4_CD25, eF570:Cycle4_FOXP3, AF700:Cycle4_Ki67, Hoechst:Cycle4_Nuclei, AF488:Cycle4_CD8, AF594:Cycle1_CD3, AF532:Cycle5_CXCL13, AF647:Cycle5_CD69, PE:Cycle5_PD1, Hoechst:Cycle5_Nuclei, AF488:Cycle5_ICOS, AF532:Cycle6_LYVE1, AF647:Cycle6_CD68, Hoechst:Cycle6_Nuclei, FITC:Cycle6_CD39, PE:Cycle6_CD35, AF532:Cycle7_Lumican, AF647:Cycle7_DCSIGN, PE:Cycle7_IRF4, Hoechst:Cycle7_Nuclei, AF488:Cycle7_aSMA, AF647:Cycle8_CD49a, Hoechst:Cycle8_Nuclei, AF488:Cycle8_Desmin, AF532:Cycle9_Vimentin, AF647:Cycle9_CD44, PE_iF594:Cycle9_CD45, Hoechst:Cycle9_Nuclei, AF488:Cycle9_CD94"
 IBEX,IBEX_nLN2.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.1038/s41596-021-00644-9,nLN2,Non-FL,38,Female,,Goat anti-rabbit IgG,AB_2535709,1:400,,,,,,,,,,SPARC,AB_2892754,1:50,BCL2,AB_2563279,1:25,CD10,AB_3083665,1:50,CD10,AB_314915,1:50,Collagen IV,AB_305584,1:200,CD20,AB_10734358,1:200,CD21,AB_2892739,1:600,BCL6,AB_10898007,1:25,CD31,AB_2566326,1:25,IgD,AB_11150595,1:25,CD138,AB_2561878,1:200,CD23,AB_2892740,1:25,CD163,AB_2563475,1:100,CD11c,AB_10612006,1:25,HLA-DR,AB_493175,1:100,CD1c,AB_1088999,1:50,CD4,AB_2802361,1:25,CD25,AB_2563588,1:25,FOXP3,AB_2573609,1:25,Ki-67,AB_10611571,1:25,CD8,AB_10549301,1:25,CD3,AB_2563236,1:100,CXCL13,AB_2892755,1:25,CD69,AB_528871,1:25,PD-1,AB_940483,1:100,ICOS,AB_2122584,1:25,LYVE-1,AB_2892756,1:100,CD68,AB_3073741,1:100,CD39,AB_940425,1:50,CD35,AB_2292231,1:800,Lumican,AB_2892757,1:50,DC-SIGN,AB_1186092,1:50,IRF4,AB_2563005,1:10,a-SMA,AB_2574461,1:100,CD49a,AB_1236407,1:50,Desmin,AB_2892748,1:200,Vimentin,AB_2892753,1:200,CD44,AB_493681,1:50,CD45,AB_2892742,1:50,CD94,AB_314536,1:50,OMAP-1,https://lod.humanatlas.io/omap/1-human-lymph-node-ibex/v1.4/,/nLN2/,Raw image,"Bleaching artifacts in the following channels: Collagen IV, CD4, and CD39. Small squares corresponding to image corruption when writing to .ims file masked out prior to analysis in CD4, Hoechst, and CD44 channels. CXCL13 signal brightest on FDCs and stromal cells. Dim CXCL13 present on all cells in sample related to detection of soluble CXCL13.",7.3,"AF532:Cycle1_SPARC, AF647:Cycle1_BCL2, PE:Cycle1_CD10, AF700:Cycle1_CollagenIV, Hoechst:Cycle1_Nuclei, AF488:Cycle1_CD20, AF594:Cycle1_CD3, AF532:Cycle2_CD21, AF647:Cycle2_BCL6, PE:Cycle2_CD138, AF700:Cycle2_CD31, AF488:Cycle2_IgD, AF532:Cycle3_CD23, AF647:Cycle3_CD163, PE:Cycle3_CD1c, AF700:Cycle3_CD11c, AF488:Cycle3_HLADR, AF532:Cycle4_CD4, AF647:Cycle4_CD25, eF570:Cycle4_FOXP3, AF700:Cycle4_Ki67, AF488:Cycle4_CD8, AF532:Cycle5_CXCL13, AF647:Cycle5_CD69, PE:Cycle5_PD1, AF488:Cycle5_ICOS, AF532:Cycle6_LYVE1, AF647:Cycle6_CD68, PE:Cycle6_CD35, AF647:Cycle7_DCSIGN, PE:Cycle7_IRF4, AF647:Cycle9_CD44, AF488:Cycle9_aSMA, AF532:Cycle10_Lumican, PE:Cycle12_CD39, PE:Cycle13_CD94, PE:Cycle14_CD49a, AF594:Cycle17_Vimentin, AF488:Cycle18_Desmin, PE_iF594:Cycle19_CD45"
 CellDIVE_IBEX,CellDIVE_IBEX_Immune_nLN3.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.5281/zenodo.7693279,nLN3,Non-FL,26,Female,,Goat anti-mouse IgG1,AB_2535764,1:200,Donkey anti-rabbit IgG,AB_2536183,1:400,Donkey anti-goat IgG,AB_2556671,1:200,Donkey anti-rat IgG,AB_2556611,1:200,IRF4,AB_10003502,1:10,BCL2,AB_3083666,1:500,CD10,AB_354652,1:50,CD20,AB_10734358,1:100,CD21,AB_3083669,1:200,CD68,AB_3073741,1:50,DC-SIGN,AB_10689801,1:40,CD4,AB_2889191,1:25,CD3D,AB_2728789,1:50,CD8,AB_2650712,1:50,Ki-67,AB_1660247,1:100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMAP-18,https://lod.humanatlas.io/omap/18-lymph-node-cell-dive-ibex/v1.0/,/nLN3/,Raw image,"Several channels are dim on a 16-bit scale. For best rendering: CD4 (Max: 5000), IRF4 (Max: 5000), and CD10 (Max: 3000). Antibody aggregrates in the following channels were masked out prior to analysis: CD10, Ki-67, and IRF4.",3.5,"AF647:Cycle1_BCL2, DL755:Cycle1_CD10, PE:Cycle2_CD21, AF647:Cycle2_CD68, DL755:Cycle2_DCSIGN, Hoechst:Cycle1_Nuclei, AF488:Cycle2_CD20, AF555:Cycle3_CD3, AF647:Cycle3_CD8, AF750:Cycle3_Ki67, AF488:Cycle3_CD4, AF488:Cycle1_IRF4"
-CellDIVE_IBEX,CellDIVE_IBEX_Stromal_nLN3.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.5281/zenodo.7693279,nLN3,Non-FL,26,Female,,Donkey anti-mouse IgG,AB_162542,1:200,Donkey anti-Goat IgG,AB_2556671,1:200,,,,,,,CD20,AB_10734358,1:100,Desmin,AB_3083670,1:50,SPARC,AB_355728,1:100,a-SMA,AB_2574461,1:50,Lumican,AB_2139483,1:50,Vimentin,AB_3083677,1:500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,/nLN3/,Raw image,,3.3,"AF488:Cycle1_CD20, AF647:Cycle1_Desmin, DL755:Cycle1_SPARC, Hoechst:Cycle1_Nuclei, AF555:Cycle2_Lumican, BL750:Cycle2_Vimentin, AF488:Cycle2_aSMA"
+CellDIVE_IBEX,CellDIVE_IBEX_Stromal_nLN3.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.5281/zenodo.7693279,nLN3,Non-FL,26,Female,,Donkey anti-mouse IgG,AB_162542,1:200,Donkey anti-goat IgG,AB_2556671,1:200,,,,,,,CD20,AB_10734358,1:100,Desmin,AB_3083670,1:50,SPARC,AB_355728,1:100,a-SMA,AB_2574461,1:50,Lumican,AB_2139483,1:50,Vimentin,AB_3083677,1:500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,/nLN3/,Raw image,,3.3,"AF488:Cycle1_CD20, AF647:Cycle1_Desmin, DL755:Cycle1_SPARC, Hoechst:Cycle1_Nuclei, AF555:Cycle2_Lumican, BL750:Cycle2_Vimentin, AF488:Cycle2_aSMA"
 CellDIVE_IBEX,CellDIVE_IBEX_Immune_nLN4.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.5281/zenodo.7693279,nLN4,Non-FL,50,Female,,Goat anti-mouse IgG1,AB_2535764,1:200,Donkey anti-rabbit IgG,AB_2536183,1:400,Donkey anti-goat IgG,AB_2556671,1:200,Donkey anti-rat IgG,AB_2556611,1:200,IRF4,AB_10003502,1:10,BCL2,AB_3083666,1:500,CD10,AB_354652,1:50,CD20,AB_10734358,1:100,CD21,AB_3083669,1:200,CD68,AB_3073741,1:50,DC-SIGN,AB_10689801,1:40,CD4,AB_2889191,1:25,CD3D,AB_2728789,1:50,CD8,AB_2650712,1:50,Ki-67,AB_1660247,1:100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMAP-18,https://lod.humanatlas.io/omap/18-lymph-node-cell-dive-ibex/v1.0/,/nLN4/,Raw image,"Several channels are dim on a 16-bit scale. For best rendering: CD4 (Max: 5500), IRF4 (Max: 5000), CD20 (Max: 5000), and CD10 (Max: 5000). ",1.2,"AF647:Cycle1_BCL2, DL755:Cycle1_CD10, PE:Cycle2_CD21, AF647:Cycle2_CD68, Hoechst:Cycle1_Nuclei, AF488:Cycle2_CD20, AF555:Cycle3_CD3, AF647:Cycle3_CD8, AF750:Cycle3_Ki67, AF488:Cycle3_CD4, DL755:Cycle2_DCSIGN, AF488:Cycle1_IRF4"
-CellDIVE_IBEX,CellDIVE_IBEX_Stromal_nLN4.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.5281/zenodo.7693279,nLN4,Non-FL,50,Female,,Donkey anti-mouse IgG,AB_162542,1:200,Donkey anti-Goat IgG,AB_2556671,1:200,,,,,,,CD20,AB_10734358,1:100,Desmin,AB_3083670,1:50,SPARC,AB_355728,1:100,a-SMA,AB_2574461,1:50,Lumican,AB_2139483,1:50,Vimentin,AB_3083677,1:500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,/nLN4/,Raw image,Several channels are dim on a 16-bit scale. For best rendering: SPARC (Max: 5000) and CD20 (Max: 6500).,0.73,"AF488:Cycle1_CD20, AF647:Cycle1_Desmin, DL755:Cycle1_SPARC, Hoechst:Cycle1_Nuclei,  AF488:Cycle2_aSMA, AF555:Cycle2_Lumican, BL750:Cycle2_Vimentin"
+CellDIVE_IBEX,CellDIVE_IBEX_Stromal_nLN4.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.5281/zenodo.7693279,nLN4,Non-FL,50,Female,,Donkey anti-mouse IgG,AB_162542,1:200,Donkey anti-goat IgG,AB_2556671,1:200,,,,,,,CD20,AB_10734358,1:100,Desmin,AB_3083670,1:50,SPARC,AB_355728,1:100,a-SMA,AB_2574461,1:50,Lumican,AB_2139483,1:50,Vimentin,AB_3083677,1:500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,/nLN4/,Raw image,Several channels are dim on a 16-bit scale. For best rendering: SPARC (Max: 5000) and CD20 (Max: 6500).,0.73,"AF488:Cycle1_CD20, AF647:Cycle1_Desmin, DL755:Cycle1_SPARC, Hoechst:Cycle1_Nuclei,  AF488:Cycle2_aSMA, AF555:Cycle2_Lumican, BL750:Cycle2_Vimentin"
 IBEX,IBEX_rLN1.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.1038/s41596-021-00644-9,rLN1,Non-FL,38,Male,,Goat anti-rabbit IgG,AB_2535709,1:400,,,,,,,,,,SPARC,AB_2892754,1:50,BCL2,AB_2563279,1:25,CD10,AB_3083665,1:50,CD10,AB_314915,1:50,Collagen IV,AB_305584,1:200,CD20,AB_10734358,1:200,CD21,AB_2892739,1:600,BCL6,AB_10898007,1:25,CD31,AB_2566326,1:25,IgD,AB_11150595,1:25,CD138,AB_2561878,1:200,CD23,AB_2892740,1:25,CD163,AB_2563475,1:100,CD11c,AB_10612006,1:25,HLA-DR,AB_493175,1:100,CD1c,AB_1088999,1:50,CD4,AB_2802361,1:25,CD25,AB_2563588,1:25,FOXP3,AB_2573609,1:25,Ki-67,AB_10611571,1:25,CD8,AB_10549301,1:25,CD3,AB_2563236,1:100,CXCL13,AB_2892755,1:25,CD69,AB_528871,1:25,PD-1,AB_940483,1:100,ICOS,AB_2122584,1:25,LYVE-1,AB_2892756,1:100,CD68,AB_3073741,1:100,CD39,AB_940425,1:50,CD35,AB_2292231,1:800,Lumican,AB_2892757,1:50,DC-SIGN,AB_1186092,1:50,IRF4,AB_2563005,1:10,a-SMA,AB_2574461,1:100,CD49a,AB_1236407,1:50,Desmin,AB_2892748,1:200,Vimentin,AB_2892753,1:200,CD44,AB_493681,1:50,CD45,AB_2892742,1:50,CD94,AB_314536,1:50,OMAP-1,https://lod.humanatlas.io/omap/1-human-lymph-node-ibex/v1.4/,/rLN1/,Raw image,"Bleaching artifacts in CD10 channel. BCL2 channel very dim (best rendering max 21). CXCL13 signal brightest on FDCs and stromal cells. Dim CXCL13 present on all cells in sample related to detection of soluble CXCL13. High autofluorescence in CD94 channel, signal gated on CD45.",14.8,"AF532:Cycle1_SPARC, AF647:Cycle1_BCL2, AF700:Cycle1_CollagenIV, Hoechst:Cycle1_Nuclei, AF488:Cycle1_CD20, PE:Cycle1_CD10, AF532:Cycle2_CD21, AF647:Cycle2_BCL6, AF700:Cycle2_CD31, Hoechst:Cycle2_Nuclei, AF488:Cycle2_IgD, PE:Cycle2_CD138, AF532:Cycle3_CD23, AF647:Cycle3_CD163, AF700:Cycle3_CD11c, Hoechst:Cycle3_Nuclei, AF488:Cycle3_HLADR, PE:Cycle3_CD1c, AF532:Cycle4_CD4, AF647:Cycle4_CD25, AF700:Cycle4_Ki67, Hoechst:Cycle4_Nuclei, AF488:Cycle4_CD8, AF594:Cycle4_CD3, eF570:Cycle4_FOXP3, AF532:Cycle5_CXCL13, AF647:Cycle5_CD69, PE:Cycle5_PD1, Hoechst:Cycle5_Nuclei, AF488:Cycle5_ICOS, AF532:Cycle6_LYVE1, AF647:Cycle6_CD68, PE:Cycle6_CD35, Hoechst:Cycle6_Nuclei, FITC:Cycle6_CD39, AF532:Cycle7_Lumican, AF647:Cycle7_DCSIGN, PE:Cycle7_IRF4, Hoechst:Cycle7_Nuclei, AF488:Cycle7_aSMA, AF647:Cycle8_CD49a, Hoechst:Cycle8_Nuclei, AF488:Cycle8_Desmin, AF532:Cycle9_Vimentin, AF647:Cycle9_CD44, PE_iF594:Cycle9_CD45, Hoechst:Cycle9_Nuclei,  AF488:Cycle9_CD94"
 IBEX,IBEX_FL1.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.1038/s41596-021-00644-9,FL-1,Non-Progressor,31,Male,White - Caucasian,Goat anti-rabbit IgG,AB_2535709,1:400,,,,,,,,,,SPARC,AB_2892754,1:50,BCL2,AB_2563279,1:25,CD10,AB_3083665,1:50,CD10,AB_314915,1:50,Collagen IV,AB_305584,1:200,CD20,AB_10734358,1:200,CD21,AB_2892739,1:600,BCL6,AB_10898007,1:25,CD31,AB_2566326,1:25,IgD,AB_11150595,1:25,CD138,AB_2561878,1:200,CD23,AB_2892740,1:25,CD163,AB_2563475,1:100,CD11c,AB_10612006,1:25,HLA-DR,AB_493175,1:100,CD1c,AB_1088999,1:50,CD4,AB_2802361,1:25,CD25,AB_2563588,1:25,FOXP3,AB_2573609,1:25,Ki-67,AB_10611571,1:25,CD8,AB_10549301,1:25,CD3,AB_2563236,1:100,CXCL13,AB_2892755,1:25,CD69,AB_528871,1:25,PD-1,AB_940483,1:100,ICOS,AB_2122584,1:25,LYVE-1,AB_2892756,1:100,CD68,AB_3073741,1:100,CD39,AB_940425,1:50,CD35,AB_2292231,1:800,Lumican,AB_2892757,1:50,DC-SIGN,AB_1186092,1:50,IRF4,AB_2563005,1:10,a-SMA,AB_2574461,1:100,CD49a,AB_1236407,1:50,Desmin,AB_2892748,1:200,Vimentin,AB_2892753,1:200,CD44,AB_493681,1:50,CD45,AB_2892742,1:50,CD94,AB_314536,1:50,OMAP-1,https://lod.humanatlas.io/omap/1-human-lymph-node-ibex/v1.4/,/FL1/,Raw image,"Unusual ROI due to tissue biopsy, high background in channels, background thresholded in some channels",8.2,"AF532:Cycle1_SPARC, AF647:Cycle1_BCL2, PE:Cycle1_CD10, AF700:Cycle1_CollagenIV, Hoechst:Cycle1_Nuclei, AF488:Cycle1_CD20, AF532:Cycle2_CD21, AF647:Cycle2_BCL6, AF700:Cycle2_CD31, Hoechst:Cycle2_Nuclei, AF488:Cycle2_IgD, PE:Cycle2_CD138, AF532:Cycle3_CD23, AF647:Cycle3_CD163, AF700:Cycle3_CD11c, Hoechst:Cycle3_Nuclei, AF488:Cycle3_HLADR, PE:Cycle3_CD1c, AF532:Cycle4_CD4, AF647:Cycle4_CD25, AF700:Cycle4_Ki67, Hoechst:Cycle4_Nuclei, AF488:Cycle4_CD8, AF594:Cycle4_CD3, eF570:Cycle4_FOXP3, AF532:Cycle5_CXCL13, AF647:Cycle5_CD69, PE:Cycle5_PD1, Hoechst:Cycle5_Nuclei, AF488:Cycle5_ICOS, AF647:Cycle6_CD68, PE:Cycle6_CD35, Hoechst:Cycle6_Nuclei, FITC:Cycle6_CD39, AF532:Cycle6_LYVE1, AF532:Cycle7_Lumican, AF647:Cycle7_DCSIGN, Hoechst:Cycle7_Nuclei, AF488:Cycle7_aSMA, PE:Cycle7_IRF4, AF647:Cycle8_CD49a, Hoechst:Cycle8_Nuclei, AF488:Cycle8_Desmin, AF532:Cycle9_Vimentin, AF647:Cycle9_CD44, PE_iF594:Cycle9_CD45, Hoechst:Cycle9_Nuclei, AF488:Cycle9_CD94"
 MxIF_P1,MxIF_P1_FL1.ims,Homo sapiens,NCBITaxon,NCBITaxon_9606,Lymph node,UBERON,UBERON_0000029,Cortex of lymph node,UBERON,UBERON_0002006,https://doi.org/10.5281/zenodo.7693279,FL-1,Non-Progressor,31,Male,White - Caucasian,Donkey anti-rabbit IgG,AB_141637,1:200,Donkey anti-goat IgG,AB_141494,1:200,,,,,,,CD20,AB_10734358,1:40,BCL2,AB_3083666,1:40,a-SMA,AB_2574362,1:200,CD10,AB_354652,1:50,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,/FL1/,Raw image,,0.95,"AF680:CD10, Hoechst:Nuclei, AF488:CD20, AF594:BCL2, eF660:aSMA"