Build RStudio Image #5
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| name: Build RStudio Image | |
| on: | |
| schedule: | |
| - cron: '0 0 * * *' # Run daily at midnight UTC | |
| workflow_dispatch: {} # Keep manual trigger without inputs | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Get latest Bioconductor version | |
| id: version | |
| run: | | |
| LATEST_VERSION=$(curl "https://hub.docker.com/v2/repositories/bioconductor/bioconductor_docker/tags?page_size=100&page=1&ordering=last_updated" | jq '.results[].name' | tr -d '"' | sed 's/RELEASE_//g' | sed 's/_/./g'| grep -v '-' | grep '3.' | sort -Vr | head -1) | |
| echo "BIOC_VERSION=$LATEST_VERSION" >> $GITHUB_OUTPUT | |
| - name: Login to GitHub Container Registry | |
| uses: docker/login-action@v3 | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Build and push | |
| uses: docker/build-push-action@v5 | |
| with: | |
| context: . | |
| file: ./Dockerfile | |
| push: true | |
| build-args: | | |
| BIOC_VERSION=${{ steps.version.outputs.BIOC_VERSION }} | |
| tags: | | |
| ghcr.io/bioconductor/hubsingestbiocrstudio:${{ steps.version.outputs.BIOC_VERSION }} | |
| ghcr.io/bioconductor/hubsingestbiocrstudio:latest |