New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Document output format in more detail #1624

Open

nspope opened this issue Dec 20, 2024 · 0 comments

Collaborator

nspope commented Dec 20, 2024

It'd be nice to have a section in the docs that details some of the nuances of the output tree sequences. Such as,

Time units are in generations, not years
With selection, substitutions that are not neutral will be retained as mutations above the root, but neutral substitutions are never simulated.
other stuff?

nspope mentioned this issue

should post-SLiM simplify have keep_input_roots=True? #1579

Open

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment