diff --git a/src/patterns/data/default/entity_attribute.tsv b/src/patterns/data/default/entity_attribute.tsv index 63fa4bd2..1060500e 100644 --- a/src/patterns/data/default/entity_attribute.tsv +++ b/src/patterns/data/default/entity_attribute.tsv @@ -4385,3 +4385,5 @@ OBA:2045451 attribute of response to allergen in serum UBERON:0001977 blood ser OBA:2045452 attribute of response to thyroid hormone in plasma UBERON:0001969 blood plasma OBA:2045454 attribute of response to thyroid hormone https://orcid.org/0000-0001-8314-2140 OBA:2030004 total skin mass UBERON:0002097 skin of body PATO:0000125 mass mass of the entire skin https://orcid.org/0000-0003-2699-3066 OBA:2050351 breast density UBERON:0000310 breast PATO:0001019 mass density breast tissue density PMID:37345113 https://orcid.org/0000-0001-6757-4744 +OBA:VT1000472 subcutaneous adipose mass UBERON:0002190 subcutaneous adipose tissue PATO:0000125 mass https://orcid.org/0000-0001-8314-2140 +OBA:VT0010482 body fat mass UBERON:0001013 adipose tissue PATO:0000125 mass https://orcid.org/0000-0001-8314-2140 diff --git a/src/patterns/data/default/entity_attribute_location.tsv b/src/patterns/data/default/entity_attribute_location.tsv index 40b97e5f..b590d9da 100644 --- a/src/patterns/data/default/entity_attribute_location.tsv +++ b/src/patterns/data/default/entity_attribute_location.tsv @@ -5452,3 +5452,4 @@ OBA:2045447 oxygen concentration in capillary blood CHEBI:25805 oxygen atom PAT OBA:2045448 attribute of response to heparin in plasma CHEBI:28304 heparin PATO:0000077 response to UBERON:0001969 blood plasma https://orcid.org/0000-0001-8314-2140 OBA:2045449 plasma thyroxine level CHEBI:30660 thyroxine PATO:0000070 amount UBERON:0001969 blood plasma https://orcid.org/0000-0001-8314-2140 OBA:2045450 blood hemoglobin attribute CHEBI:35143 hemoglobin PATO:0000001 quality UBERON:0000178 blood blood haemoglobin attribute https://orcid.org/0000-0001-8314-2140 +OBA:VT0010690 pericardial fat pad mass UBERON:0003916 fat pad PATO:0000125 mass UBERON:0035814 pericardial fat https://orcid.org/0000-0001-8314-2140 diff --git a/src/patterns/definitions.owl b/src/patterns/definitions.owl index 0ecc0a66..a8a0d749 100644 --- a/src/patterns/definitions.owl +++ b/src/patterns/definitions.owl @@ -14657,6 +14657,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14725,6 +14726,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14860,6 +14862,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -119498,6 +119501,14 @@ AnnotationAssertion(Annotation( "blood immunoglobulin M amount"^^xsd:string) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) +# Class: (body fat mass) + +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute"^^xsd:string) "The mass of a adipose tissue."^^xsd:string) +AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140"^^xsd:string) +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute"^^xsd:string) "mass of adipose tissue"^^xsd:string) +AnnotationAssertion(rdfs:label "body fat mass"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (nervous system serotonin amount) AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location"^^xsd:string) "The amount of a serotonin when measured in nervous system."^^xsd:string) @@ -119974,6 +119985,14 @@ AnnotationAssertion(Annotation( "peritoneum morphology"^^xsd:string) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (pericardial fat pad mass) + +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location"^^xsd:string) "The mass of a fat pad when measured in pericardial fat."^^xsd:string) +AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140"^^xsd:string) +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location"^^xsd:string) "pericardial fat fat pad mass"^^xsd:string) +AnnotationAssertion(rdfs:label "pericardial fat pad mass"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) + # Class: (longissimus muscle morphology) AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of"^^xsd:string) "The morphology of a longissimus muscle."^^xsd:string) @@ -120921,6 +120940,14 @@ AnnotationAssertion(Annotation( "adipose androstenone amount"^^xsd:string) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) +# Class: (subcutaneous adipose mass) + +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute"^^xsd:string) "The mass of a subcutaneous adipose tissue."^^xsd:string) +AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140"^^xsd:string) +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute"^^xsd:string) "mass of subcutaneous adipose tissue"^^xsd:string) +AnnotationAssertion(rdfs:label "subcutaneous adipose mass"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (muscle lipid amount) AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location"^^xsd:string) "The amount of a lipid when measured in muscle organ."^^xsd:string) @@ -123638,6 +123665,7 @@ SubClassOf(ObjectIntersectionOf( Ob SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) +SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) @@ -123686,6 +123714,7 @@ SubClassOf(ObjectIntersectionOf( Ob SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) +SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))