diff --git a/Manifest.toml b/Manifest.toml index a5e4590e..ccf6c9bd 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -22,9 +22,9 @@ version = "0.4.4" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "68c4c187a232e7abe00ac29e3b03e09af9d77317" +git-tree-sha1 = "02f731463748db57cc2ebfbd9fbc9ce8280d3433" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.7.0" +version = "3.7.1" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -42,9 +42,9 @@ version = "0.2.0" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "f83ec24f76d4c8f525099b2ac475fc098138ec31" +git-tree-sha1 = "eba0af42241f0cb648806604222bab1e064edb67" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.4.11" +version = "7.5.0" [deps.ArrayInterface.extensions] ArrayInterfaceBandedMatricesExt = "BandedMatrices" @@ -135,9 +135,9 @@ uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" [[deps.CEnum]] -git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +git-tree-sha1 = "389ad5c84de1ae7cf0e28e381131c98ea87d54fc" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" -version = "0.4.2" +version = "0.5.0" [[deps.CPUSummary]] deps = ["CpuId", "IfElse", "PrecompileTools", "Static"] @@ -351,9 +351,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] -git-tree-sha1 = "36a590efdbee58b38f903ffc3b378f4a5336bc3f" +git-tree-sha1 = "59842b690c2ed12428a741c1334f3c68d1377fb6" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.134.0" +version = "6.135.0" [deps.DiffEqBase.extensions] DiffEqBaseDistributionsExt = "Distributions" @@ -481,9 +481,9 @@ version = "1.0.4" [[deps.EnzymeCore]] deps = ["Adapt"] -git-tree-sha1 = "d8701002a745c450c03b890f10d53636d1a8a7ea" +git-tree-sha1 = "ab81396e4e7b61f5590db02fa1c17fae4f16d7ab" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.6.2" +version = "0.6.3" [[deps.EpollShim_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -828,9 +828,9 @@ version = "2.1.91+0" [[deps.JuliaFormatter]] deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"] -git-tree-sha1 = "0bac3374ff3aa798148669ecb5559ba20c8b0e73" +git-tree-sha1 = "b11c259ae111b08aabdc2ff5186dad12a95fedca" uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899" -version = "1.0.40" +version = "1.0.41" [[deps.JumpProcesses]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"] @@ -1012,9 +1012,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearSolve]] deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "EnzymeCore", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] -git-tree-sha1 = "5f97525abf8d81f9554e836a7e5802fd89bb0594" +git-tree-sha1 = "27732d23d88534a7b735dcf8f411daf34293a39e" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.12.1" +version = "2.14.0" [deps.LinearSolve.extensions] LinearSolveBandedMatricesExt = "BandedMatrices" @@ -1186,15 +1186,17 @@ version = "1.2.0" [[deps.NonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "9203b3333c9610664de2e8cbc23cfd726663df7d" +git-tree-sha1 = "adbde57261effaa44b4d3d5942651a4bb22aefc3" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "2.4.0" +version = "2.5.0" [deps.NonlinearSolve.extensions] + NonlinearSolveBandedMatricesExt = "BandedMatrices" NonlinearSolveFastLevenbergMarquardtExt = "FastLevenbergMarquardt" NonlinearSolveLeastSquaresOptimExt = "LeastSquaresOptim" [deps.NonlinearSolve.weakdeps] + BandedMatrices = "aae01518-5342-5314-be14-df237901396f" FastLevenbergMarquardt = "7a0df574-e128-4d35-8cbd-3d84502bf7ce" LeastSquaresOptim = "0fc2ff8b-aaa3-5acd-a817-1944a5e08891" @@ -1550,23 +1552,25 @@ version = "0.1.0" [[deps.SLEEFPirates]] deps = ["IfElse", "Static", "VectorizationBase"] -git-tree-sha1 = "4b8586aece42bee682399c4c4aee95446aa5cd19" +git-tree-sha1 = "897b39ec056c0619ea87adc7eeadba0bec0cf931" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" -version = "0.6.39" +version = "0.6.40" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"] -git-tree-sha1 = "151c322c309d879d114d1c0bee69c61d5933357f" +git-tree-sha1 = "1c2a4e245744dd76b2eb677d3535ffad16d8b989" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.4.3" +version = "2.5.0" [deps.SciMLBase.extensions] + SciMLBasePartialFunctionsExt = "PartialFunctions" SciMLBasePyCallExt = "PyCall" SciMLBasePythonCallExt = "PythonCall" SciMLBaseRCallExt = "RCall" SciMLBaseZygoteExt = "Zygote" [deps.SciMLBase.weakdeps] + PartialFunctions = "570af359-4316-4cb7-8c74-252c00c2016b" PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" PythonCall = "6099a3de-0909-46bc-b1f4-468b9a2dfc0d" RCall = "6f49c342-dc21-5d91-9882-a32aef131414" @@ -1664,9 +1668,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "336fd944a1bbb8873bfa8171387608ca93317d68" +git-tree-sha1 = "590acc2c3baf98aaff7d2f1990a6f1de6138361e" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.8.0" +version = "2.9.1" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" @@ -1792,9 +1796,9 @@ version = "5.10.1+6" [[deps.Sundials]] deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "PrecompileTools", "Reexport", "SciMLBase", "SparseArrays", "Sundials_jll"] -git-tree-sha1 = "b208d5379feee6c1c9f9660e4294e77e40946884" +git-tree-sha1 = "71dc65a2d7decdde5500299c9b04309e0138d1b4" uuid = "c3572dad-4567-51f8-b174-8c6c989267f4" -version = "4.20.0" +version = "4.20.1" [[deps.Sundials_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"]