Pipfile

[[source]]
name = "pypi"
url = "https://pypi.org/simple"
verify_ssl = true

[packages]
multinet = {path = ".",editable = true}
python-arango = "==4.4.0"
newick = "==0.9.2"
requests = "==2.22.0"
webargs = "==5.4.0"
flask = "==1.1.1"
flask-cors = "==3.0.8"
flasgger = "==0.9.4"
typing-extensions = "==3.7.4.1"
uwsgi = "==2.0.18"
sentry-sdk = {extras = ["flask"],version = "==0.14.1"}
gunicorn = "==20.0.4"
authlib = "==0.14.1"
pyjwt = ">=1.7.1"
pydantic = ">=1.7.2"
python-dateutil = ">=2.8.1"

[dev-packages]
black = "==19.3b0"
flake8 = "==3.7.8"
flake8-black = "==0.1.0"
flake8-bugbear = "==19.8.0"
flake8-docstrings = "==1.3.1"
flake8-quotes = "==2.1.0"
flake8-builtins = "==1.4.2"
flake8-comprehensions = "==3.2.2"
flake8-eradicate = "==0.2.4"
flake8-mutable = "==1.2.0"
flake8-mypy = "==17.8.0"
mypy = "==0.770"
mypy_extensions = "==0.4.3"
pep8-naming = "==0.9.1"
pytest = "==5.1.0"
pytest-cov = "==2.7.1"
pytest-xdist = "==1.29.0"
pre-commit = "==1.18.2"

[requires]
python_version = "3.7"

[pipenv]
allow_prereleases = true

[scripts]
serve = "flask run -p ${FLASK_SERVE_PORT}"
profile = "python profile_app.py"
test-server-up = "sh ./scripts/server/start.sh"
test-server-down = "sh ./scripts/server/stop.sh"
test-server-clean = "sh ./scripts/server/clean.sh"
lint = "flake8"
test = "pytest -v -W ignore::DeprecationWarning test"
typecheck = "mypy -p multinet --disallow-untyped-defs"
coverage = "pytest -W ignore::DeprecationWarning test --cov=multinet"
format = "black ."
populate = "python scripts/data.py populate"