build-deploy-on-conda.yml

name: Conda Build

on: [push]

jobs:
  build-linux:
    runs-on: ubuntu-latest

    steps:
    - uses: actions/checkout@v2
    - name: Set PlantSeg version name
      run: echo "RELEASE_VERSION=${GITHUB_REF#refs/*/}" >> $GITHUB_ENV
    - name: Print PlantSeg version name
      run: |
        echo $RELEASE_VERSION
    - uses: conda-incubator/setup-miniconda@v2
      with:
        auto-activate-base: true
        activate-environment: ""
        channels: local,conda-forge,defaults
        channel-priority: false

    - shell: bash -l {0}
      run: |
        conda info --envs
    - name: Build PlantSeg using Boa
      shell: bash -l {0}
      run: |
          # conda config --set allow_conda_downgrades true
          # conda install conda=4.12.0 -y
          conda install --yes -c conda-forge mamba
          mamba install -q boa
          conda mambabuild -c conda-forge conda-recipe
    - name: Create PlantSeg env
      run: |
          mamba create -n plant-seg -c local -c conda-forge plantseg pytest
    - name: Run pytest
      shell: bash -l {0}
      run: |
        conda activate plant-seg
        pytest
        conda deactivate
    - name: Deploy on conda
      if: ${{ startsWith( github.ref, 'refs/tags/') && success() }}
      env:
        ANACONDA_SECRET: ${{ secrets.ANACONDA_TOKEN }}
      shell: bash -l {0}
      run: |
        mamba install -q anaconda-client
        anaconda -t $ANACONDA_SECRET upload $CONDA/conda-bld/**/plantseg-*.tar.bz2