diff --git a/.github/workflows/scheduled.yaml b/.github/workflows/scheduled.yaml index a1198468..748e803f 100644 --- a/.github/workflows/scheduled.yaml +++ b/.github/workflows/scheduled.yaml @@ -38,6 +38,8 @@ jobs: strategy: ${{ matrix.test-strategy }} additional-env-vars: | PKG_SYSREQS_DRY_RUN=true + extra-deps: | + teal.slice (>= 0.5.1.9022), teal.code (>= 0.5.0.9022) branch-cleanup: if: > github.event_name == 'schedule' || ( diff --git a/DESCRIPTION b/DESCRIPTION index fcbfe554..cbf64cd2 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -33,7 +33,7 @@ Depends: ggplot2, R (>= 4.1), shiny, - teal (>= 0.15.0) + teal (>= 0.15.2.9103) Imports: checkmate, DT, @@ -41,19 +41,19 @@ Imports: forcats, hermes (>= 1.7.1), lifecycle, - MultiAssayExperiment, - rtables (>= 0.5.1), + MultiAssayExperiment (>= 1.32.0), + rtables (>= 0.6.11), S4Vectors, shinyRadioMatrix (>= 0.2.1), shinyWidgets, stats, stringr, - SummarizedExperiment, - teal.data (>= 0.3.0.9018), - teal.logger (>= 0.3.0.9003), - teal.reporter (>= 0.2.0), - teal.widgets (>= 0.4.0), - tern (>= 0.7.10), + SummarizedExperiment (>= 1.36.0), + teal.data (>= 0.6.0.9025), + teal.logger (>= 0.3.0.9004), + teal.reporter (>= 0.3.1.9023), + teal.widgets (>= 0.4.2.9025), + tern (>= 0.9.7), utils Suggests: BiocStyle, @@ -66,14 +66,23 @@ Suggests: R6, rmarkdown, rvest, - shinytest2 (>= 0.2.0), - testthat (>= 2.0) + shinytest2 (>= 0.3.2), + testthat (>= 3.1.5) VignetteBuilder: knitr RdMacros: lifecycle biocViews: Config/Needs/website: insightsengineering/nesttemplate +Config/Needs/verdepcheck: tidyverse/ggplot2, rstudio/shiny, + insightsengineering/teal, insightsengineering/teal.slice, insightsengineering/teal.transform, + mllg/checkmate, bioc::edgeR, rstudio/DT, tidyverse/forcats, insightsengineering/hermes, + r-lib/lifecycle, bioc::MultiAssayExperiment, insightsengineering/rtables, bioc::S4Vectors, + antonmalko/shinyRadioMatrix, dreamRs/shinyWidgets, tidyverse/stringr, bioc::SummarizedExperiment, + insightsengineering/teal.data, insightsengineering/teal.logger, insightsengineering/teal.reporter, + insightsengineering/teal.widgets, insightsengineering/tern, bioc::BiocStyle, r-lib/covr, + tidyverse/dplyr, futureverse/globals, yihui/knitr, daroczig/logger, HenrikBengtsson/matrixStats, + r-lib/R6, rstudio/rmarkdown, tidyverse/rvest, rstudio/shinytest2, r-lib/testthat Config/testthat/edition: 3 Encoding: UTF-8 Language: en-US