diff --git a/environment.yml b/environment.yml index c968d26b..b15e0824 100644 --- a/environment.yml +++ b/environment.yml @@ -9,7 +9,7 @@ dependencies: # - bioimage.core via submodule - python 3.9.* - numpy >=1.21,<2 - - grpcio=1.44 # protobuf 5 requires protoc version > 3.19.0 that requires grpcio >= 1.44 + - grpcio=1.49.1 # protobuf 5 requires protoc version > 3.19.0 that requires grpcio >= 1.44 - marshmallow-union - marshmallow=3.12.* - marshmallow-jsonschema @@ -20,6 +20,7 @@ dependencies: - scipy - typing-extensions - xarray + - pytorch-3dunet - setuptools - pip diff --git a/setup.py b/setup.py index 7aebd69c..8d9c03b9 100644 --- a/setup.py +++ b/setup.py @@ -33,6 +33,7 @@ "numpy<2", # pytorch 2.2.2-py3.9_0 for macos is compiled with numpy 1.* "protobuf", "pydantic>=2.7.0,<2.10", + "pytorch-3dunet", "pyyaml", "xarray", ],