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test_suite.yml
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name: Test suite
on:
# Trigger the CI whenever a commit is pushed to main or develop, i.e., a PR is merged
push:
branches: [main, develop]
# Trigger the CI whenever a commit is pushed to an open PR
pull_request:
env:
# Environment variables for GISS modelE
GISS_HOME: /__w/GISS-GC/GISS-GC
ModelE_Support: /__w/GISS-GC/GISS-GC/run
DATA: /__w/GISS-GC/GISS-GC/run/prod_input_files
# Environment variables for compiler
CC: gcc
CXX: g++
FC: gfortran
F90: gfortran
F77: gfortran
# Misc. environment variables
F_UFMTENDIAN: big
KMP_STACKSIZE: 100000000
OMP_NUM_THREADS: 1
jobs:
# Test that GISS-GC can be compiled without error
compile:
runs-on: ubuntu-22.04
container:
image: ghcr.io/fetch4/giss-gc-dev-env:latest
credentials:
username: ${{ github.actor }}
password: ${{ secrets.github_token }}
steps:
- uses: actions/checkout@v2
- name: Setup submodules
run: |
git config --global --add safe.directory ${GISS_HOME}
git submodule init
git submodule update
- name: Build tools
run: |
. /opt/spack-environment/activate.sh
cd ${GISS_HOME}/model/mk_diags
/bin/bash compscr
- name: Create fake inputs
run: |
# Make run directories
mkdir -p ${DATA}
mkdir -p ${ModelE_Support}/exec
mkdir -p ${ModelE_Support}/huge_space
mkdir -p ${ModelE_Support}/prod_decks
mkdir -p ${ModelE_Support}/prod_runs
# Fake input files
touch ${DATA}/CD144X90.ext.nc
touch ${DATA}/cloud.epsilon4.72x46
touch ${DATA}/CO2profile.Jul16-2017.txt
touch ${DATA}/CROPS_and_pastures_Pongratz_to_Hurtt_144X90N_nocasp.nc
touch ${DATA}/dH2O_by_CH4_monthly
touch ${DATA}/GHG.CMIP6.1-2014.txt
touch ${DATA}/GIC.144X90.DEC01.1.ext_1.nc
touch ${DATA}/GLMELT_144X90_gas.OCN.nc
touch ${DATA}/H2Ocont_MT_CKD
touch ${DATA}/Irrig144x90_1848to2100_FixedFuture_v3.nc
touch ${DATA}/ISCCP.tautables
touch ${DATA}/LWCorrTables33k
touch ${DATA}/LWTables33k_lowH2O_CO2_O3_planck_1-800
touch ${DATA}/miescatpar.abcdv2
touch ${DATA}/MSU_SSU_RSS_weights.txt
touch ${DATA}/NCARIC.144x90.D7712010_ext.nc
touch ${DATA}/o3_2010_shindell_144x90x49_April1850.nc
touch ${DATA}/oct2003.relhum.nr.Q633G633.table
touch ${DATA}/OST_144x90.1876-1885avg.CMIP6.nc
touch ${DATA}/RD_Fd.nc
touch ${DATA}/RD_Fd.names.txt
touch ${DATA}/REG2X2.5
touch ${DATA}/S144X900098M.ext.nc
touch ${DATA}/sgpgxg.table8
touch ${DATA}/SICE_144x90.1876-1885avg.CMIP6.nc
touch ${DATA}/soil_textures_top30cm_2x2.5
touch ${DATA}/soilcarb_top30cm_2x2.5.nc
touch ${DATA}/solar.CMIP6official.ann1850-2299_with_E3_fastJ.nc
touch ${DATA}/STRATAER.VOL.1850-2014_CMIP6_hdr
touch ${DATA}/top_index_144x90_a.ij.ext.nc
touch ${DATA}/topcld.trscat8
touch ${DATA}/V144x90_EntMM16_height_trimmed_scaled_ext.nc
touch ${DATA}/V144x90_EntMM16_lai_max_trimmed_scaled_ext.nc
touch ${DATA}/V144x90_EntMM16_lai_trimmed_scaled_ext.nc
touch ${DATA}/V144x90_EntMM16_lc_max_trimmed_scaled_nocrops.ext.nc
touch ${DATA}/Z2HX2fromZ1QX1N.BS1.nc
touch ${DATA}/ZSIfac_144x90.1876-1885avg.CMIP6.nc
touch ${DATA}/ZVAR2X25A.nc
mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/BCA
mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/BCB
mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/BCdalbsn
mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/DUST
mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/NIT
mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/O3
mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/OCA
mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/SSA
mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/SUL
mkdir -p ${DATA}/nudging/merra2
touch ${DATA}/nudging/merra2/uwnd.2014.MERRA2onGISSE2.nc4
touch ${DATA}/nudging/merra2/vwnd.2014.MERRA2onGISSE2.nc4
touch ${DATA}/nudging/merra2/uwnd.2015.MERRA2onGISSE2.nc4
touch ${DATA}/nudging/merra2/vwnd.2015.MERRA2onGISSE2.nc4
touch ${DATA}/nudging/merra2/uwnd.2016.MERRA2onGISSE2.nc4
touch ${DATA}/nudging/merra2/vwnd.2016.MERRA2onGISSE2.nc4
- name: Build GISS with GISS_ONLY rundeck
run: |
. /opt/spack-environment/activate.sh
export RUNID=GISS_ONLY
# Environment variables for passing NetCDF-C and NetCDF-Fortran
export NETCDF_HOME=$(nc-config --prefix)
export NETCDF_F_HOME=$(nf-config --prefix)
# Environment variable for OpenMPI build
MPIF90=$(find /opt/software -name mpif90 | head -n 1)
export MPI_ROOT=${MPIF90%/bin/mpif90}
# Copy over rundeck and modelErc
cp .github/rundecks/${RUNID}.R decks
cp .github/modelErc ~/.modelErc
# Build the model
cd ${GISS_HOME}/decks
make clean
make clean_all
make -j setup RUN=${RUNID} F90=mpif90 GC=NO MECH=carbon
- name: Build GISS-GC with GISS_GC_14 rundeck
run: |
. /opt/spack-environment/activate.sh
export RUNID=GISS_GC_14
# Environment variables for passing NetCDF-C paths to GEOS-Chem
export NETCDF_HOME=$(nc-config --prefix)
export GC_BIN=${NETCDF_HOME}/bin
export GC_INCLUDE=${NETCDF_HOME}/include
export GC_LIB=${NETCDF_HOME}/lib
# Environment variables for passing NetCDF-Fortran paths to GEOS-Chem
export NETCDF_F_HOME=$(nf-config --prefix)
export GC_F_BIN=${NETCDF_F_HOME}/bin
export GC_F_INCLUDE=${NETCDF_F_HOME}/include
export GC_F_LIB=${NETCDF_F_HOME}/lib
# Environment variable for OpenMPI build
MPIF90=$(find /opt/software -name mpif90 | head -n 1)
export MPI_ROOT=${MPIF90%/bin/mpif90}
# Copy over rundeck and modelErc
cp .github/rundecks/${RUNID}.R decks
cp .github/modelErc ~/.modelErc
# Build the model
cd ${GISS_HOME}/decks
make clean
make clean_all
make -j setup RUN=${RUNID} F90=mpif90 GC=YES MECH=carbon