docker-compose.yaml

version: '3.4'
services:
  minio:
    image: minio/minio:RELEASE.2023-01-02T09-40-09Z
    ports:
      - 9100:9000
      - 9101:9001
    volumes:
      - minio_storage:/data
    environment:
      MINIO_ROOT_USER: minio
      MINIO_ROOT_PASSWORD: miniotest
    command: server --console-address ":9001" /data
    healthcheck:
      test: curl http://minio:9000/minio/health/live
      interval: 5s
      timeout: 5s
      retries: 10
      start_period: 2s

  createbucket:
    image: minio/mc:RELEASE.2022-12-24T15-21-38Z
    depends_on:
      - minio
    entrypoint: >
      /bin/sh -c "
      /usr/bin/mc config host add myminio http://minio:9000 minio miniotest;
      /usr/bin/mc mb myminio/epp;
      /usr/bin/mc mb myminio/biorxiv;
      exit 0;
      "

  temporal-db:
    image: percona/percona-server:8.0.34-26.1-multi
    ports:
      - 3306:3306
    environment:
      MYSQL_ROOT_PASSWORD: testmysql
    volumes:
      - mysql_data:/var/lib/mysql
    healthcheck:
      test: ["CMD", "mysqladmin" ,"ping", "-h", "localhost"]
      start_period: 2s
      interval: 5s
      timeout: 5s
      retries: 10


  temporal:
    image: temporalio/auto-setup:1.26.2
    ports:
      - 7233:7233
    environment:
      DB: mysql8
      MYSQL_SEEDS: temporal-db
      MYSQL_USER: root
      MYSQL_PWD: testmysql
      DBNAME: temporal
      VISIBILITY_DBNAME: "temporalvisibility"
      DEFAULT_NAMESPACE: default
      DEFAULT_NAMESPACE_RETENTION: 72h
      SKIP_ADD_CUSTOM_SEARCH_ATTRIBUTES: true
      TEMPORAL_ADDRESS: temporal:7233
    healthcheck:
      test: temporal operator namespace list
      interval: 5s
      timeout: 5s
      retries: 10
      start_period: 2s
    depends_on:
      temporal-db:
        condition: service_healthy
    volumes:
      - temporal_data:/data

  temporal-setup-search:
    image: temporalio/admin-tools:1.23.1.0
    environment:
      TEMPORAL_ADDRESS: temporal:7233
    entrypoint: bash -c 'temporal operator search-attribute create --name ManuscriptId --type Text && temporal operator search-attribute create --name DocmapURL --type Text'
    depends_on:
      temporal:
        condition: service_healthy

  temporal-ui:
    image: temporalio/ui:2.34.0
    ports:
      - 8233:8233
    environment:
      TEMPORAL_ADDRESS: temporal:7233
      TEMPORAL_UI_PORT: 8233
    healthcheck:
      test: curl http://localhost:8233 -I
    depends_on:
      temporal:
        condition: service_healthy

  yarn:
    build:
      context: .
      target: deps
    command: yarn
    volumes:
      - ./package.json:/app/package.json
      - ./yarn.lock:/app/yarn.lock
      - node_modules:/app/node_modules

  worker:
    build:
      context: .
      target: worker
    depends_on:
      createbucket:
        condition: service_completed_successfully
      yarn:
        condition: service_completed_successfully
      temporal-setup-search:
        condition: service_completed_successfully
      temporal:
        condition: service_healthy
      encoda:
        condition: service_healthy
      xslt:
        condition: service_healthy
      api:
        condition: service_healthy
    environment:
      EPP_SERVER_URI: http://api:3000
      TEMPORAL_SERVER: temporal:7233
      TASK_QUEUE_NAME: epp

      # EPP S3 bucket
      S3_ENDPOINT: http://minio:9000
      AWS_ACCESS_KEY_ID: minio
      AWS_SECRET_ACCESS_KEY: miniotest
      BUCKET_NAME: epp

      # Meca S3 Bucket (on minio)
      MECA_S3_ENDPOINT: http://minio:9000
      MECA_AWS_ACCESS_KEY_ID: minio
      MECA_AWS_SECRET_ACCESS_KEY: miniotest

      # other services
      XSLT_TRANSFORM_ADDRESS: http://xslt:80
      ENCODA_TRANSFORM_ADDRESS: http://encoda:3000
    restart: on-failure
    command:
      - yarn
      - start:worker:dev
    healthcheck:
      test: curl -s http://localhost:9464/metrics  | grep 'temporal_worker_start{namespace="default",service_name="temporal-core-sdk",task_queue="epp"}'  | grep 1
      interval: 5s
      timeout: 5s
      retries: 10
      start_period: 2s
    volumes:
      - ./src:/app/src
      - node_modules:/app/node_modules

  docmaps-worker:
    build:
      context: .
      target: worker
    depends_on:
      createbucket:
        condition: service_completed_successfully
      yarn:
        condition: service_completed_successfully
      temporal-setup-search:
        condition: service_completed_successfully
      temporal:
        condition: service_healthy
      encoda:
        condition: service_healthy
      xslt:
        condition: service_healthy
      api:
        condition: service_healthy
    environment:
      EPP_SERVER_URI: http://api:3000
      TEMPORAL_SERVER: temporal:7233
      TASK_QUEUE_NAME: epp
      TEMPORAL_TASK_QUEUE: import-docmaps

      # EPP S3 bucket
      S3_ENDPOINT: http://minio:9000
      AWS_ACCESS_KEY_ID: minio
      AWS_SECRET_ACCESS_KEY: miniotest
      BUCKET_NAME: epp

      # Meca S3 Bucket (on minio)
      MECA_S3_ENDPOINT: http://minio:9000
      MECA_AWS_ACCESS_KEY_ID: minio
      MECA_AWS_SECRET_ACCESS_KEY: miniotest

      # other services
      XSLT_TRANSFORM_ADDRESS: http://xslt:80
      ENCODA_TRANSFORM_ADDRESS: http://encoda:3000
    restart: on-failure
    command:
      - yarn
      - start:worker:dev
    healthcheck:
      test: curl -s http://localhost:9464/metrics  | grep 'temporal_worker_start{namespace="default",service_name="temporal-core-sdk",task_queue="import-docmaps"}'  | grep 1
      interval: 5s
      timeout: 5s
      retries: 10
      start_period: 2s
    volumes:
      - ./src:/app/src
      - node_modules:/app/node_modules

  # Downstream services for EPP
  ## Database (MongoDB) server
  mongodb:
    image: mongo
    environment:
      MONGO_INITDB_ROOT_USERNAME: admin
      MONGO_INITDB_ROOT_PASSWORD: testtest
    volumes:
      - mongodb_data:/data/db
    healthcheck:
      test: echo 'db.runCommand("ping").ok' | mongosh mongodb:27017/test -u admin -p testtest --authenticationDatabase admin --quiet
      interval: 5s
      timeout: 5s
      retries: 10
      start_period: 2s

  ## Database (MongoDB) GUI
  mongo-express:
    image: mongo-express
    environment:
      - ME_CONFIG_OPTIONS_EDITORTHEME=dracula
      - ME_CONFIG_MONGODB_SERVER=mongodb
      - ME_CONFIG_MONGODB_ENABLE_ADMIN=true
      - ME_CONFIG_MONGODB_AUTH_USERNAME=admin
      - ME_CONFIG_MONGODB_AUTH_PASSWORD=testtest
    depends_on:
      mongodb:
        condition: service_healthy
    ports:
      - "8081:8081"

  ## BIORXIV XSLT
  xslt:
    image: ghcr.io/elifesciences/enhanced-preprints-biorxiv-xslt-api:master-30d97395-20250115.1118
    healthcheck:
      test: "curl -H 'X-Passthrough: true' -f http://localhost:80/ -d '<test></test>' || exit 1"
      interval: 60s
      timeout: 60s
      retries: 3
      start_period: 60s
    restart: always
    ports:
      - 3004:80

  ## ENCODA API
  encoda:
    image: ghcr.io/elifesciences/enhanced-preprints-encoda:master-da08f0ec-20250113.1939
    healthcheck:
      test: "wget --post-data '<test></test>' -O - http://localhost:3000/"
      interval: 10s
      timeout: 5s
      retries: 3
      start_period: 3s
    restart: always
    ports:
      - 3005:3000

  ## EPP API
  api:
    image: ghcr.io/elifesciences/enhanced-preprints-server:master-c074bcc5-20250111.0112
    healthcheck:
      test: sh -c 'apk add curl; curl http://localhost:3000/'
      interval: 5s
      timeout: 5s
      retries: 10
      start_period: 2s
    depends_on:
      mongodb:
        condition: service_healthy
    environment:
      REPO_TYPE: MongoDB
      REPO_CONNECTION: mongodb:27017
      REPO_USERNAME: admin
      REPO_PASSWORD: testtest
    ports:
      - 3000:3000

  app:
    image: ghcr.io/elifesciences/enhanced-preprints-client:master-c2fa68f7-20250114.1457
    healthcheck:
      test: sh -c 'apk add curl; curl http://app:3000/'
      interval: 5s
      timeout: 5s
      retries: 20
      start_period: 30s
    environment:
      NEXT_PUBLIC_SITE_NAME: ${NEXT_PUBLIC_SITE_NAME:-elife}
      API_SERVER: http://api:3000
      NEXT_PUBLIC_IMAGE_SERVER: /iiif
      MANUSCRIPT_CONFIG_FILE: /opt/epp-client/data/manuscripts.json
      IS_AUTOMATED: true
    depends_on:
      api:
        condition: service_healthy
    ports:
      - 3001:3000

  ## Image Server
  image-server:
    image: ghcr.io/elifesciences/epp-image-server:master-1fdda8a5-20241217.0916
    environment:
      SOURCE_STATIC: S3Source
      S3SOURCE_ENDPOINT: http://minio:9000/
      S3SOURCE_ACCESS_KEY_ID: minio
      S3SOURCE_SECRET_KEY: miniotest
      S3SOURCE_BASICLOOKUPSTRATEGY_PATH_PREFIX: /automation/
      S3SOURCE_BASICLOOKUPSTRATEGY_BUCKET_NAME: epp
    ports:
      - "8182:8182"
    healthcheck:
      test: curl http://image-server:8182/
      interval: 5s
      timeout: 5s
      retries: 10
      start_period: 2s

  ## Expose API, client and IIIF via proxy
  nginx:
    image: nginx:latest
    depends_on:
      api:
        condition: service_healthy
      app:
        condition: service_healthy
    ports:
      - 8080:80
    volumes:
      - ./.docker/nginx.conf:/etc/nginx/conf.d/default.conf

volumes:
  minio_storage:
  mongodb_data:
  mysql_data:
  temporal_data:
  node_modules: