-
BUG FIX
test_singularity_installation()
: No longer fails when Apptainer is used instead of Singularity. -
MINOR CHANGES
run()
: Use different environment variables when Singularity is actually Apptainer. -
NEW FUNCTIONALITY
run_auto_mount()
: Added helper function for lettingbabelwhale
figure out which directories to mount automatically (#26, thanks @joelnitta!).
- BUG FIX
detect_backend()
: Print helpful message when neither docker or singularity are installed (Thanks @KforKuma).
-
BUG FIX
test_docker_installation()
: Usedocker info
to check whether docker is available. -
BUG FIX: Redirect stdout and stderr to files to avoid processx hangs (#24, thanks @joelnitta!).
-
MINOR CHANGE: Change maintainer from Wouter to Robrecht.
-
MINOR CHANGE: Added an
environment_variables
to the singularity and docker config.
- BUG FIX
set_config_default()
: Fixed refactoring error; usesaveRDS
instead ofsave
.
- Release of babelwhale, a package to run docker and singularity containers from R.