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<!DOCTYPE>
<html>
<head>
<title>cytoscape-cola.js demo</title>
<meta name="viewport" content="width=device-width, user-scalable=no, initial-scale=1, maximum-scale=1">
<script src="https://unpkg.com/cytoscape/dist/cytoscape.min.js"></script>
<!-- for testing with local version of cytoscape.js -->
<!--<script src="../cytoscape.js/build/cytoscape.js"></script>-->
<script src="https://unpkg.com/webcola/WebCola/cola.min.js"></script>
<script src="cytoscape-cola.js"></script>
<style>
body {
font-family: helvetica;
font-size: 14px;
}
#cy {
width: 100%;
height: 100%;
position: absolute;
left: 0;
top: 0;
z-index: 999;
}
h1 {
opacity: 0.5;
font-size: 1em;
}
</style>
<script>
document.addEventListener('DOMContentLoaded', function(){
var cy = window.cy = cytoscape({
container: document.getElementById('cy'),
autounselectify: true,
boxSelectionEnabled: false,
layout: {
name: 'cola'
},
style: [
{
selector: 'node',
css: {
'background-color': '#f92411'
}
},
{
selector: 'edge',
css: {
'line-color': '#f92411'
}
}
],
elements: {
nodes: [
{
data: {
id: "1",
label: "P"
}
},
{
data: {
id: "2",
label: "sucrose phosphate phosphatase"
}
},
{
data: {
id: "4",
label: "sucrose 6-phosphate"
}
},
{
data: {
id: "6",
label: "sucrose"
}
},
{
data: {
id: "8",
label: "invertase"
}
},
{
data: {
id: "10",
label: "fructose"
}
},
{
data: {
id: "12",
label: "fructokinase"
}
},
{
data: {
id: "14",
label: "fructose 6-phosphate"
}
},
{
data: {
id: "20",
label: "phosphoglucose isomerase"
}
},
{
data: {
id: "22",
label: "glucose 6-phosphate"
}
},
{
data: {
id: "28",
label: "glucose"
}
},
{
data: {
id: "30",
label: "hexokinase"
}
},
{
data: {
id: "33",
label: "sucrose synthase"
}
},
{
data: {
id: "36",
label: "UDP - glucose"
}
},
{
data: {
id: "38",
label: "sucrose phosphate synthase"
}
},
{
data: {
id: "41",
label: "UDP"
}
},
{
data: {
id: "44",
label: "fructose 6-phosphate"
}
},
{
data: {
id: "46",
label: "ATP"
}
},
{
data: {
id: "47",
label: "ATP"
}
},
{
data: {
id: "52",
label: "ATP"
}
},
{
data: {
id: "57",
label: "ADP"
}
},
{
data: {
id: "66",
label: "PP"
}
},
{
data: {
id: "71",
label: "UTP"
}
},
{
data: {
id: "76",
label: "UDP glucose pyrophosphorylase"
}
},
{
data: {
id: "80",
label: "glucose 1-phosphate"
}
},
{
data: {
id: "86",
label: "phospho- glucomutase (cPGM)"
}
},
{
data: {
id: "89",
label: "G1P transporter"
}
},
{
data: {
id: "90",
label: "P"
}
},
{
data: {
id: "95",
label: "P"
}
},
{
data: {
id: "102",
label: "P"
}
},
{
data: {
id: "103",
label: "P"
}
},
{
data: {
id: "104",
label: "G6P transporter"
}
},
{
data: {
id: "109",
label: "glucose 6-phosphate"
}
},
{
data: {
id: "115",
label: "phospho- glucomutase (cPGM)"
}
},
{
data: {
id: "121",
label: "glucose 1-phosphate"
}
},
{
data: {
id: "128",
label: "ADPglucose pyrophosphorylase (pAGPase)"
}
},
{
data: {
id: "130",
label: "ADP - glucose"
}
},
{
data: {
id: "136",
label: "PP"
}
},
{
data: {
id: "141",
label: "ATP"
}
},
{
data: {
id: "148",
label: "inorganic diphosphatase"
}
},
{
data: {
id: "149",
label: "P"
}
},
{
data: {
id: "156",
label: "phosphate transporter"
}
},
{
data: {
id: "158",
label: "P"
}
},
{
data: {
id: "164",
label: "starch synthase (simpl.)"
}
},
{
data: {
id: "166",
label: "ADP"
}
},
{
data: {
id: "172",
label: "starch"
}
},
{
data: {
id: "178",
label: "ATP/ADP transporter"
}
},
{
data: {
id: "179",
label: "ADP"
}
},
{
data: {
id: "184",
label: "ADP"
}
},
{
data: {
id: "189",
label: "ATP"
}
}
],
edges: [
{
data: {
source: "2",
target: "1"
}
},
{
data: {
source: "4",
target: "2"
}
},
{
data: {
source: "2",
target: "6"
}
},
{
data: {
source: "6",
target: "8"
}
},
{
data: {
source: "8",
target: "10"
}
},
{
data: {
source: "12",
target: "14"
}
},
{
data: {
source: "14",
target: "20"
}
},
{
data: {
source: "20",
target: "22"
}
},
{
data: {
source: "8",
target: "28"
}
},
{
data: {
source: "28",
target: "30"
}
},
{
data: {
source: "30",
target: "22"
}
},
{
data: {
source: "6",
target: "33"
}
},
{
data: {
source: "33",
target: "10"
}
},
{
data: {
source: "33",
target: "36"
}
},
{
data: {
source: "36",
target: "38"
}
},
{
data: {
source: "38",
target: "4"
}
},
{
data: {
source: "38",
target: "41"
}
},
{
data: {
source: "41",
target: "33"
}
},
{
data: {
source: "44",
target: "38"
}
},
{
data: {
source: "52",
target: "12"
}
},
{
data: {
source: "12",
target: "57"
}
},
{
data: {
source: "46",
target: "30"
}
},
{
data: {
source: "30",
target: "47"
}
},
{
data: {
source: "71",
target: "76"
}
},
{
data: {
source: "76",
target: "66"
}
},
{
data: {
source: "76",
target: "36"
}
},
{
data: {
source: "80",
target: "76"
}
},
{
data: {
source: "22",
target: "86"
}
},
{
data: {
source: "86",
target: "80"
}
},
{
data: {
source: "95",
target: "89"
}
},
{
data: {
source: "89",
target: "90"
}
},
{
data: {
source: "102",
target: "104"
}
},
{
data: {
source: "80",
target: "89"
}
},
{
data: {
source: "104",
target: "109"
}
},
{
data: {
source: "115",
target: "109"
}
},
{
data: {
source: "121",
target: "89"
}
},
{
data: {
source: "121",
target: "115"
}
},
{
data: {
source: "121",
target: "128"
}
},
{
data: {
source: "128",
target: "130"
}
},
{
data: {
source: "141",
target: "128"
}
},
{
data: {
source: "128",
target: "136"
}
},
{
data: {
source: "136",
target: "148"
}
},
{
data: {
source: "148",
target: "149"
}
},
{
data: {
source: "149",
target: "156"
}
},
{
data: {
source: "156",
target: "158"
}
},
{
data: {
source: "130",
target: "164"
}
},
{
data: {
source: "164",
target: "166"
}
},
{
data: {
source: "178",
target: "179"
}
},
{
data: {
source: "184",
target: "178"
}
},
{
data: {
source: "178",
target: "189"
}
},
{
data: {
source: "141",
target: "178"
}
},
{
data: {
source: "104",
target: "103"
}
},
{
data: {
source: "10",
target: "12"
}
},
{
data: {
source: "164",
target: "172"
}
},
{
data: {
source: "22",
target: "104"
}
}
]
}
});
});
</script>
</head>
<body>
<h1>cytoscape-cola demo</h1>
<div id="cy"></div>
</body>
</html>