From 946a7cd40ea6de09871617733c8fd50a75be4005 Mon Sep 17 00:00:00 2001
From: Jacky Li <jacli@jacli03.phage.bcgsc.ca>
Date: Wed, 16 Oct 2024 13:01:47 -0700
Subject: [PATCH] feat: add svBurdenHidden flag field to mutationBurden
 DEVSU-2461

---
 app/models/reports/mutationBurden.js      | 10 ++++++++++
 test/routes/report/mutationBurden.test.js |  2 +-
 2 files changed, 11 insertions(+), 1 deletion(-)

diff --git a/app/models/reports/mutationBurden.js b/app/models/reports/mutationBurden.js
index 995cef299..fc8134107 100644
--- a/app/models/reports/mutationBurden.js
+++ b/app/models/reports/mutationBurden.js
@@ -112,6 +112,16 @@ module.exports = (sequelize, Sq) => {
         description: 'somatic indels and SNVs per megabase in the genome',
       },
     },
+    svBurdenHidden: {
+      name: 'svBurdenHidden',
+      field: 'sv_burden_hidden',
+      type: Sq.BOOLEAN,
+      defaultValue: false,
+      allowNull: false,
+      jsonSchema: {
+        description: 'SV Burden Hidden',
+      },
+    },
   }, {
     ...DEFAULT_REPORT_OPTIONS,
     tableName: 'reports_mutation_burden',
diff --git a/test/routes/report/mutationBurden.test.js b/test/routes/report/mutationBurden.test.js
index 6d5812d0b..85b2ac861 100644
--- a/test/routes/report/mutationBurden.test.js
+++ b/test/routes/report/mutationBurden.test.js
@@ -23,7 +23,7 @@ const mutationBurdenProperties = [
   'ident', 'createdAt', 'updatedAt', 'role', 'codingSnvCount', 'truncatingSnvCount',
   'codingIndelsCount', 'frameshiftIndelsCount', 'qualitySvCount', 'qualitySvExpressedCount',
   'codingSnvPercentile', 'codingIndelPercentile', 'qualitySvPercentile',
-  'totalSnvCount', 'totalIndelCount', 'totalMutationsPerMb',
+  'totalSnvCount', 'totalIndelCount', 'totalMutationsPerMb', 'svBurdenHidden',
 ];
 
 const checkMutationBurden = (mutationObject) => {