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Promptable Counterfactual Diffusion Model for Brain Tumor Analysis with MRIs

This repository contains the implementation of the "Promptable Counterfactual Diffusion Model for Brain Tumor Analysis with MRIs."

Key Features

  • Counterfactual Generation: ­Developed a unified solution for brain tumor segmentation and generation using a novel diffusion model with mask-level prompting for guided manipulation of MRI images.
  • Transformer Integration: ­Integrate Transformer-based denoising network to capture global context more effectively, enhancing the model's performance in handling complex tumor morphologies.
  • Advanced Tumor Synthesis and Generation: Implemented a two-step tumor generation process, allowing for realistic tumor structure synthesis and position transfer, enhancing data augmentation and clinical decision support.

Installation

Clone the repository and install the required dependencies:

git clone https://github.com/arcadelab/counterfactual_diffusion.git
cd counterfactual_diffusion
pip install -r requirements.txt