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Amber alchemical Error:The floating-point precision of lambda cannot be inconsistent #425

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ECNUwangjn opened this issue Nov 13, 2024 · 3 comments
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AMBER MD engine

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@ECNUwangjn
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For the amber alchemical process, if the floating-point precision of lambda is inconsistent, such as [0.0, 0.05, 0.1...], errors may occur.

It seems that only lambda values like [0.0, 0.1, 0.2...1.0] can be used. I would appreciate it if you could help resolve this issue.

Additionally, the version installed via pip does not include the abfe workflow and is missing a requirement.

@xiki-tempula
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Thanks for reporting the error. I wonder if I could have your input file? Thanks.

Additionally, the version installed via pip does not include the abfe workflow and is missing a requirement

Do you mind post the error? I think we recommend using conda as pip has various weird errors.

@orbeckst
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Thank you for reporting @ECNUwangjn . Could you please help with additional information?

Please remember that this is an open source project where people help and fix things as volunteers in free time, nobody gets paid for anything. Thus, we rely on users to help as much as possible and this means especially providing any information that makes it easier for us to address issues. Ideally, you provide input files and instructions that allow us to reproduce the error.

@orbeckst orbeckst added the AMBER MD engine label Dec 18, 2024
@orbeckst
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Additionally, it's really helpful if you open one issue per problem, thus, this issue for the lambda problem and another issue for the installation, so that we can cleanly address them separately.

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