Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Data acquisition issues. #1

Open
RadiantWu opened this issue Oct 27, 2023 · 0 comments
Open

Data acquisition issues. #1

RadiantWu opened this issue Oct 27, 2023 · 0 comments

Comments

@RadiantWu
Copy link

Hello! I would like to reproduce Figure 2e of the article“Exploring functional protein covariation across single cells using nPOP”
But I meet two problems:

  1. I download normalized data in the form of proteins x single cells matrices for pSCoPE and plexDIA from Additional file 4, data S2. But this matrices just provide cell id without cell type. How can I get the cell type for each cell.
  2. I also want to get the data about the proteomes of 200-cell samples of melanoma and monocyte cells analyzed by established bulk methods. Where I can find it?
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant