itkwidgets 0.31.3

itkwidgets 0.31.3

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.31.2 to v0.31.3

Enhancements

• Bump itkwidgets to 0.31.3 (0ff2df2)

itkwidgets 0.31.2

itkwidgets 0.31.2

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.30.1 to v0.31.2

Enhancements

• Bump itkwidgets to 0.31.2 (3c6258a)

itkwidgets 0.30.1

itkwidgets 0.30.1

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.30.0 to v0.30.1

Enhancements

• Bump itkwidgets to 0.30.1 (1e40a26)

itkwidgets 0.30.0

itkwidgets 0.30.0

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.29.0 to v0.30.0

Enhancements

• Bump itkwidgets to 0.30.0 (a1b1aaa)
• Support zarr.Group vtk.js geometries, point_sets (bbd1104)
• Add vtkjs_to_zarr, zarr_to_vtkjs (3ea8bfe)
• Bump itk-vtk-viewer to 10.5.0 (0df41a6)
• Add point_set_sizes trait (b54267e)
• Add lut trait (bdc17bc)
• Add sample_distance trait (3fb9570)
• Multi-component vmin, vmax (aaf2d81)

Documentation Updates

• Update default point_set_opacities (cc49139)
• Update LabelMaps example (985f9ae)

Bug Fixes

• Improve multi-component slice color blending (0288aa4)
• Fix scalar image slice out-of-range rendering (a418c5e)
• Keep volume rendering quality when switching tabs (7d4a3be)
• Fix updates to point set model representations (27ed142)
• Fix available colormaps (19842cc)

Style Changes

• Rename label_map to label_image (38464b4)

itkwidgets 0.28.0

itkwidgets 0.28.0

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.27.5 to v0.28.0

Enhancements

• Bump itkwidgets to 0.28.0 (c08f379)
• Update itk-vtk-viewer to 10.2.0 (8dba5cd)
• Use new imagePicked event for clicked_slice_point (fa25a93)
• Add label_map_weights traitlet (8a6c13e)
• Support label_map_names (4401035)
• to_itk_image does not return None with itk.Image (2713ebc)
• Update to itk-vtk-viewer 10.0.0 (45e0d93)
• Default cmap with label_map for intensity image is grayscale (4dcff8c)
• Add clicked_slice_point trait (f61da9c)
• Add initial label_map support (d657c79)
• Update itk-vtk-viewer, vtk.js for label map support (6064d7a)

Documentation Updates

• LabelMap example updates (5d5fc43)
• Add LabelMap example (fba096b)

Bug Fixes

• Update itk dependency to 5.1.0.post2 (6a944be)
• Fixes for the line profiler widget (0c60bce)
• Ensure NumPy point set arrays are contiguous (bfd319f)
• Update dependencies for to 5.1.0.post1 (9ded916)
• Fetch git tags in release workflow (bf3856c)

itkwidgets 0.26.0

itkwidgets 0.26.0

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.25.3 to v0.26.0

Enhancements

• Bump itkwidgets to 0.26.0 (e770ede)
• Add support for itk.PointBasedSpatialObject's (9ef6b16)
• Bump zstd to v1.4.4 (60477a7)

Bug Fixes

• Update itk-vtk-viewer to 9.12.3 (2224d18)

itkwidgets 0.25.2

itkwidgets 0.25.2

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.25.1 to v0.25.2

Enhancements

• Bump itkwidgets to 0.25.2 (83cebdc)
• Background color matches JupyterLab theme color (8c198a1)

Documentation Updates

• Note compare widget in README (92a7c30)
• Add data structure links (d148853)
• Describe how to install with user permissions (b23fc9d)
• Describe how to disable scrolling in JupyterLab (fbf52a8)

Bug Fixes

• Apply camera updates with 2D images (9936626)

itkwidgets 0.25.1

itkwidgets 0.25.1

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.25.0 to v0.25.1

Enhancements

• Bump itkwidgets to 0.25.1 (15ffc63)

Documentation Updates

• Update to the new MyBinder badge (556ae1c)
• Add commit links to release notes (c20bbcb)

Bug Fixes

• Initialize all geometry opacities in JavaScript (9203f17)
• Require ipympl>=0.4.1 (05b21b7)

itkwidgets 0.25.0

itkwidgets 0.25.0

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.24.2 to v0.25.0

Enhancements

• Bump itkwidgets to 0.25.0 (254fd05)
• Bump Webpack-related dependencies (358f7a9)
• compare widget (e3cab40)
• Expose image slicing plane positions as traits (3dbc815)
• Support skan.csr.Skeleton (ec066cd)
• Add traitlet for volume rendering blend mode (1caad0e)
• Require ipywidgets 7.5.1 for grid layout template support (931ec50)
• Enable jupyter-webrtc in Binder JupyterLab (c19bb55)
• GitHub Actions testing for macOS (7afe4b1)
• Add GitHub Action build and test workflow (201f3b2)

Documentation Updates

• skan segmentation skeleton example under Data types (15e94aa)
• Remove scrolled metadata from cells (9b42ac7)
• Use urllib.request in 3DImage example (c7e75b5)
• Use JupyterLab for MyBinder links (087f0e6)
• Example use urllib.request import urlretrieve (9262993)
• More suggestions on reloading during development (529ce56)
• Remove scrolling from 3DImage example (ac629ee)
• Add conda-forge version badge (11363ef)
• Add Zenodo software DOI citation badge (e45d741)
• Add GitHub Actions Build and test badge (6709295)
• Add release notes generation script (93eec7e)
• Move RELEASE docs to utilities/ (8410eb2)

Platform Fixes

• Set MPLBACKEND to Qt5Agg in CI testing (913b8aa)

Bug Fixes

• Do not subscribe to blend mode changed with 2D images (7356aa6)
• Remove units debugging output (4e81b96)
• Replace ModuleNotFoundError with ImportError (558e16a)

Style Changes

• Address flake8 issues (534061f)

itkwidgets 0.24.2

itkwidgets 0.24.2

itkwidgets provides interactive Jupyter widgets to visualize images, point sets, and meshes in 3D or 2D.

Installation

pip install itkwidgets

or

conda install -c conda-forge itkwidgets

Changes from v0.24.1 to v0.24.2

Enhancements

• Bump itkwidgets to 0.24.2
• Add units trait for scale bar units
• Bump itk-vtk-viewer for scale bar formatting